Hb_001953_140

Information

Type -
Description -
Location Contig1953: 157066-158966
Sequence    

Annotation

kegg
ID rcu:RCOM_1505080
description Taxadien-5-alpha-ol O-acetyltransferase, putative (EC:2.3.1.144)
nr
ID XP_002511135.1
description Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
swissprot
ID Q94CD1
description Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1
trembl
ID B9RAB0
description Taxadien-5-alpha-ol O-acetyltransferase, putative OS=Ricinus communis GN=RCOM_1505080 PE=4 SV=1
Gene Ontology
ID GO:0016747
description omega-hydroxypalmitate o-feruloyl transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001953_140 0.0 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
2 Hb_000031_300 0.1806375883 - - PREDICTED: histidine kinase 5 [Jatropha curcas]
3 Hb_004116_150 0.199124118 - - conserved hypothetical protein [Ricinus communis]
4 Hb_031108_010 0.200427348 - - PREDICTED: calmodulin-binding protein 25-like [Jatropha curcas]
5 Hb_001329_080 0.210304738 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
6 Hb_000717_040 0.2119762599 transcription factor TF Family: B3 hypothetical protein POPTR_0015s03590g [Populus trichocarpa]
7 Hb_001433_160 0.2150199468 - - phosphatase 2C family protein [Populus trichocarpa]
8 Hb_120117_010 0.2160059921 - - Disease resistance protein RFL1, putative [Ricinus communis]
9 Hb_018790_050 0.2166153151 - - hypothetical protein CICLE_v10017858mg [Citrus clementina]
10 Hb_014720_050 0.2167637959 - - PREDICTED: serine/threonine-protein kinase ATM-like [Jatropha curcas]
11 Hb_000152_170 0.2181067368 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
12 Hb_182970_010 0.220005325 - - calmodulin-binding protein 60-D [Populus trichocarpa]
13 Hb_155946_030 0.2209284444 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
14 Hb_000465_350 0.2211710869 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
15 Hb_011618_100 0.2213459619 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA1, putative [Ricinus communis]
16 Hb_164114_010 0.2216331278 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
17 Hb_000072_190 0.2217117416 - - putative S-adenosylmethionine decarboxylase [Prunus dulcis]
18 Hb_006615_160 0.2218463105 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
19 Hb_001636_060 0.2232672219 - - Putative serine/threonine-protein kinase-like protein CCR3 [Glycine soja]
20 Hb_000340_560 0.2238328891 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001953_140 Hb_001953_140 Hb_000031_300 Hb_000031_300 Hb_001953_140--Hb_000031_300 Hb_004116_150 Hb_004116_150 Hb_001953_140--Hb_004116_150 Hb_031108_010 Hb_031108_010 Hb_001953_140--Hb_031108_010 Hb_001329_080 Hb_001329_080 Hb_001953_140--Hb_001329_080 Hb_000717_040 Hb_000717_040 Hb_001953_140--Hb_000717_040 Hb_001433_160 Hb_001433_160 Hb_001953_140--Hb_001433_160 Hb_000236_480 Hb_000236_480 Hb_000031_300--Hb_000236_480 Hb_001828_110 Hb_001828_110 Hb_000031_300--Hb_001828_110 Hb_002965_060 Hb_002965_060 Hb_000031_300--Hb_002965_060 Hb_000152_170 Hb_000152_170 Hb_000031_300--Hb_000152_170 Hb_000465_350 Hb_000465_350 Hb_000031_300--Hb_000465_350 Hb_138086_010 Hb_138086_010 Hb_004116_150--Hb_138086_010 Hb_004116_150--Hb_000152_170 Hb_007254_050 Hb_007254_050 Hb_004116_150--Hb_007254_050 Hb_000054_140 Hb_000054_140 Hb_004116_150--Hb_000054_140 Hb_001247_160 Hb_001247_160 Hb_004116_150--Hb_001247_160 Hb_008406_070 Hb_008406_070 Hb_004116_150--Hb_008406_070 Hb_009476_110 Hb_009476_110 Hb_031108_010--Hb_009476_110 Hb_000776_050 Hb_000776_050 Hb_031108_010--Hb_000776_050 Hb_124677_020 Hb_124677_020 Hb_031108_010--Hb_124677_020 Hb_001579_070 Hb_001579_070 Hb_031108_010--Hb_001579_070 Hb_155946_030 Hb_155946_030 Hb_031108_010--Hb_155946_030 Hb_000086_620 Hb_000086_620 Hb_031108_010--Hb_000086_620 Hb_001472_140 Hb_001472_140 Hb_001329_080--Hb_001472_140 Hb_000009_200 Hb_000009_200 Hb_001329_080--Hb_000009_200 Hb_005714_100 Hb_005714_100 Hb_001329_080--Hb_005714_100 Hb_007382_100 Hb_007382_100 Hb_001329_080--Hb_007382_100 Hb_182970_010 Hb_182970_010 Hb_001329_080--Hb_182970_010 Hb_056196_060 Hb_056196_060 Hb_001329_080--Hb_056196_060 Hb_164114_010 Hb_164114_010 Hb_000717_040--Hb_164114_010 Hb_089140_110 Hb_089140_110 Hb_000717_040--Hb_089140_110 Hb_002325_060 Hb_002325_060 Hb_000717_040--Hb_002325_060 Hb_000984_260 Hb_000984_260 Hb_000717_040--Hb_000984_260 Hb_003633_100 Hb_003633_100 Hb_000717_040--Hb_003633_100 Hb_000009_150 Hb_000009_150 Hb_001433_160--Hb_000009_150 Hb_002284_080 Hb_002284_080 Hb_001433_160--Hb_002284_080 Hb_000002_360 Hb_000002_360 Hb_001433_160--Hb_000002_360 Hb_000009_300 Hb_000009_300 Hb_001433_160--Hb_000009_300 Hb_000024_130 Hb_000024_130 Hb_001433_160--Hb_000024_130 Hb_003670_030 Hb_003670_030 Hb_001433_160--Hb_003670_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.328828 0.322083 0.342023 0 0.0395757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0948548 0.044605 0.0851547 0.0496732

CAGE analysis