Hb_001329_080

Information

Type -
Description -
Location Contig1329: 57611-60745
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa006733mg
description hypothetical protein
nr
ID XP_012082966.1
description PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
swissprot
ID Q3EAF9
description Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1
trembl
ID A0A067JWR2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14083 PE=3 SV=1
Gene Ontology
ID GO:0004722
description probable protein phosphatase 2c 49

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09386: 57623-60765 , PASA_asmbl_09387: 58289-58608
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001329_080 0.0 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
2 Hb_001472_140 0.0856648975 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
3 Hb_000009_200 0.1075823822 - - PREDICTED: UPF0496 protein At2g18630 [Jatropha curcas]
4 Hb_005714_100 0.1191254847 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
5 Hb_007382_100 0.1195549638 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
6 Hb_182970_010 0.1263101945 - - calmodulin-binding protein 60-D [Populus trichocarpa]
7 Hb_056196_060 0.1276664315 - - hexokinase [Manihot esculenta]
8 Hb_003633_150 0.1290272662 - - hypothetical protein JCGZ_23296 [Jatropha curcas]
9 Hb_001294_050 0.1307475677 desease resistance Gene Name: NB-ARC Disease resistance protein RPP13, putative [Ricinus communis]
10 Hb_002122_030 0.132458009 - - -
11 Hb_001102_200 0.1346408527 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Jatropha curcas]
12 Hb_012272_010 0.1348534497 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_005408_080 0.1352007858 - - PREDICTED: U-box domain-containing protein 16 [Jatropha curcas]
14 Hb_000836_210 0.1357567453 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
15 Hb_006615_160 0.1360957145 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
16 Hb_003670_030 0.1372053111 - - PREDICTED: probable calcium-binding protein CML35 [Jatropha curcas]
17 Hb_008112_010 0.1386181188 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Jatropha curcas]
18 Hb_001226_170 0.1389493011 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
19 Hb_001318_140 0.1410493917 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
20 Hb_005064_070 0.1427251815 - - PREDICTED: uncharacterized protein LOC105648318 [Jatropha curcas]

Gene co-expression network

sample Hb_001329_080 Hb_001329_080 Hb_001472_140 Hb_001472_140 Hb_001329_080--Hb_001472_140 Hb_000009_200 Hb_000009_200 Hb_001329_080--Hb_000009_200 Hb_005714_100 Hb_005714_100 Hb_001329_080--Hb_005714_100 Hb_007382_100 Hb_007382_100 Hb_001329_080--Hb_007382_100 Hb_182970_010 Hb_182970_010 Hb_001329_080--Hb_182970_010 Hb_056196_060 Hb_056196_060 Hb_001329_080--Hb_056196_060 Hb_000836_210 Hb_000836_210 Hb_001472_140--Hb_000836_210 Hb_004297_080 Hb_004297_080 Hb_001472_140--Hb_004297_080 Hb_008406_030 Hb_008406_030 Hb_001472_140--Hb_008406_030 Hb_002875_070 Hb_002875_070 Hb_001472_140--Hb_002875_070 Hb_005408_080 Hb_005408_080 Hb_001472_140--Hb_005408_080 Hb_000009_200--Hb_005714_100 Hb_008112_010 Hb_008112_010 Hb_000009_200--Hb_008112_010 Hb_001246_160 Hb_001246_160 Hb_000009_200--Hb_001246_160 Hb_000069_330 Hb_000069_330 Hb_000009_200--Hb_000069_330 Hb_000035_050 Hb_000035_050 Hb_000009_200--Hb_000035_050 Hb_000009_200--Hb_056196_060 Hb_005714_100--Hb_000035_050 Hb_005714_100--Hb_008112_010 Hb_005714_100--Hb_002875_070 Hb_005714_100--Hb_056196_060 Hb_001376_010 Hb_001376_010 Hb_005714_100--Hb_001376_010 Hb_001318_140 Hb_001318_140 Hb_007382_100--Hb_001318_140 Hb_000087_100 Hb_000087_100 Hb_007382_100--Hb_000087_100 Hb_001619_160 Hb_001619_160 Hb_007382_100--Hb_001619_160 Hb_001898_130 Hb_001898_130 Hb_007382_100--Hb_001898_130 Hb_003430_070 Hb_003430_070 Hb_007382_100--Hb_003430_070 Hb_003633_150 Hb_003633_150 Hb_182970_010--Hb_003633_150 Hb_002400_040 Hb_002400_040 Hb_182970_010--Hb_002400_040 Hb_001226_170 Hb_001226_170 Hb_182970_010--Hb_001226_170 Hb_003209_090 Hb_003209_090 Hb_182970_010--Hb_003209_090 Hb_182970_010--Hb_005408_080 Hb_003670_030 Hb_003670_030 Hb_056196_060--Hb_003670_030 Hb_018790_050 Hb_018790_050 Hb_056196_060--Hb_018790_050 Hb_056196_060--Hb_000035_050 Hb_056196_060--Hb_008112_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.13568 145.59 98.4369 127.284 5.26364 6.98974
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.2938 11.607 9.98986 25.8135 28.1114

CAGE analysis