Hb_001310_040

Information

Type transcription factor
Description TF Family: TAZ
Location Contig1310: 40409-41553
Sequence    

Annotation

kegg
ID rcu:RCOM_0579630
description transcription cofactor, putative
nr
ID XP_002525265.1
description transcription cofactor, putative [Ricinus communis]
swissprot
ID Q9FJX5
description BTB/POZ and TAZ domain-containing protein 4 OS=Arabidopsis thaliana GN=BT4 PE=1 SV=1
trembl
ID B9SGZ6
description Transcription cofactor, putative OS=Ricinus communis GN=RCOM_0579630 PE=4 SV=1
Gene Ontology
ID GO:0003712
description btb poz and taz domain-containing protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001310_040 0.0 transcription factor TF Family: TAZ transcription cofactor, putative [Ricinus communis]
2 Hb_148209_040 0.185957814 - - conserved hypothetical protein [Ricinus communis]
3 Hb_143748_010 0.2619846873 - - PREDICTED: uncharacterized protein LOC105648045 isoform X1 [Jatropha curcas]
4 Hb_000094_200 0.2699827087 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000477_040 0.2829568174 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000210_100 0.2832029348 - - pepsin A, putative [Ricinus communis]
7 Hb_025466_010 0.289526676 - - unnamed protein product [Vitis vinifera]
8 Hb_007574_070 0.2900847096 - - fatty acid desaturase, putative [Ricinus communis]
9 Hb_007416_100 0.2902166046 - - PREDICTED: probable xyloglucan glycosyltransferase 5 [Jatropha curcas]
10 Hb_069355_010 0.2906728932 - - NBS-LRR resistance protein RGH2 [Manihot esculenta]
11 Hb_032143_020 0.2913738284 - - hypothetical protein POPTR_0009s06310g [Populus trichocarpa]
12 Hb_025466_020 0.2921821475 - - tubulin beta-6 [Brassica oleracea var. italica]
13 Hb_000077_360 0.2941892157 - - sugar transporter, putative [Ricinus communis]
14 Hb_132840_070 0.2984664484 - - metal tolerance protein 1 [Populus trichocarpa x Populus deltoides]
15 Hb_033413_010 0.2991384118 - - Reticuline oxidase precursor, putative [Ricinus communis]
16 Hb_001481_130 0.2992499062 - - conserved hypothetical protein [Ricinus communis]
17 Hb_133279_010 0.300673217 - - spermidine synthase 1, putative [Ricinus communis]
18 Hb_012090_030 0.3023415914 - - PREDICTED: autophagy-related protein 8C isoform X2 [Phoenix dactylifera]
19 Hb_002316_010 0.304714836 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
20 Hb_007925_010 0.3057163529 - - PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001310_040 Hb_001310_040 Hb_148209_040 Hb_148209_040 Hb_001310_040--Hb_148209_040 Hb_143748_010 Hb_143748_010 Hb_001310_040--Hb_143748_010 Hb_000094_200 Hb_000094_200 Hb_001310_040--Hb_000094_200 Hb_000477_040 Hb_000477_040 Hb_001310_040--Hb_000477_040 Hb_000210_100 Hb_000210_100 Hb_001310_040--Hb_000210_100 Hb_025466_010 Hb_025466_010 Hb_001310_040--Hb_025466_010 Hb_000649_040 Hb_000649_040 Hb_148209_040--Hb_000649_040 Hb_000107_350 Hb_000107_350 Hb_148209_040--Hb_000107_350 Hb_024758_030 Hb_024758_030 Hb_148209_040--Hb_024758_030 Hb_000920_160 Hb_000920_160 Hb_148209_040--Hb_000920_160 Hb_000307_040 Hb_000307_040 Hb_148209_040--Hb_000307_040 Hb_004052_190 Hb_004052_190 Hb_143748_010--Hb_004052_190 Hb_001366_110 Hb_001366_110 Hb_143748_010--Hb_001366_110 Hb_000906_090 Hb_000906_090 Hb_143748_010--Hb_000906_090 Hb_147745_010 Hb_147745_010 Hb_143748_010--Hb_147745_010 Hb_000165_020 Hb_000165_020 Hb_143748_010--Hb_000165_020 Hb_000226_120 Hb_000226_120 Hb_143748_010--Hb_000226_120 Hb_003894_020 Hb_003894_020 Hb_000094_200--Hb_003894_020 Hb_004055_020 Hb_004055_020 Hb_000094_200--Hb_004055_020 Hb_020805_140 Hb_020805_140 Hb_000094_200--Hb_020805_140 Hb_003304_110 Hb_003304_110 Hb_000094_200--Hb_003304_110 Hb_000442_120 Hb_000442_120 Hb_000094_200--Hb_000442_120 Hb_008695_220 Hb_008695_220 Hb_000094_200--Hb_008695_220 Hb_005470_030 Hb_005470_030 Hb_000477_040--Hb_005470_030 Hb_003878_050 Hb_003878_050 Hb_000477_040--Hb_003878_050 Hb_000849_120 Hb_000849_120 Hb_000477_040--Hb_000849_120 Hb_000110_060 Hb_000110_060 Hb_000477_040--Hb_000110_060 Hb_000465_320 Hb_000465_320 Hb_000477_040--Hb_000465_320 Hb_001904_050 Hb_001904_050 Hb_000477_040--Hb_001904_050 Hb_001454_100 Hb_001454_100 Hb_000210_100--Hb_001454_100 Hb_025466_020 Hb_025466_020 Hb_000210_100--Hb_025466_020 Hb_069355_010 Hb_069355_010 Hb_000210_100--Hb_069355_010 Hb_000260_280 Hb_000260_280 Hb_000210_100--Hb_000260_280 Hb_000210_100--Hb_003878_050 Hb_000210_100--Hb_020805_140 Hb_025466_010--Hb_025466_020 Hb_000310_100 Hb_000310_100 Hb_025466_010--Hb_000310_100 Hb_000243_350 Hb_000243_350 Hb_025466_010--Hb_000243_350 Hb_001153_120 Hb_001153_120 Hb_025466_010--Hb_001153_120 Hb_006903_030 Hb_006903_030 Hb_025466_010--Hb_006903_030 Hb_012244_010 Hb_012244_010 Hb_025466_010--Hb_012244_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0412806 0.2018 0.0250198 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0612858 0 0.0877347 0.0194602 0.0974162

CAGE analysis