Hb_000307_040

Information

Type -
Description -
Location Contig307: 68623-69250
Sequence    

Annotation

kegg
ID rcu:RCOM_1599790
description glutathione-s-transferase theta, gst, putative (EC:2.5.1.18)
nr
ID XP_002510614.1
description glutathione-s-transferase theta, gst, putative [Ricinus communis]
swissprot
ID P42761
description Glutathione S-transferase F10 OS=Arabidopsis thaliana GN=GSTF10 PE=1 SV=3
trembl
ID B9R8H1
description Glutathione-s-transferase theta, gst, putative OS=Ricinus communis GN=RCOM_1599790 PE=3 SV=1
Gene Ontology
ID GO:0005622
description glutathione s-transferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000307_040 0.0 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
2 Hb_024758_030 0.1671900573 - - hypothetical protein JCGZ_16050 [Jatropha curcas]
3 Hb_000907_160 0.1711704702 - - calcineurin-like phosphoesterase [Manihot esculenta]
4 Hb_000563_470 0.1712900579 - - PREDICTED: uncharacterized protein LOC105643461 [Jatropha curcas]
5 Hb_007632_070 0.17467816 - - kinase, putative [Ricinus communis]
6 Hb_039222_010 0.1776008403 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Jatropha curcas]
7 Hb_132840_150 0.1872227803 - - RNA-binding region-containing protein, putative [Ricinus communis]
8 Hb_000190_170 0.191533564 - - PREDICTED: chlorophyllase-1-like [Jatropha curcas]
9 Hb_016333_010 0.1916043763 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
10 Hb_127839_010 0.1925205191 - - hypothetical protein PRUPE_ppa000956mg [Prunus persica]
11 Hb_011004_070 0.1943339912 - - hypothetical protein RCOM_1494490 [Ricinus communis]
12 Hb_087992_010 0.1964522131 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
13 Hb_000303_060 0.1999927646 - - o-methyltransferase, putative [Ricinus communis]
14 Hb_001958_010 0.2023752087 - - hypothetical protein CICLE_v100078532mg, partial [Citrus clementina]
15 Hb_001863_330 0.2030836193 - - RNA-binding region-containing protein, putative [Ricinus communis]
16 Hb_003050_020 0.2033912952 - - glycosyl hydrolase family 17 family protein [Populus trichocarpa]
17 Hb_002411_090 0.2044815397 - - PREDICTED: putative RING-H2 finger protein ATL69 [Jatropha curcas]
18 Hb_000003_500 0.2058613878 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12-like [Jatropha curcas]
19 Hb_000003_210 0.2074575281 - - PREDICTED: GEM-like protein 4 [Jatropha curcas]
20 Hb_008195_060 0.2075171153 transcription factor TF Family: NAC NAC transcription factor 018 [Jatropha curcas]

Gene co-expression network

sample Hb_000307_040 Hb_000307_040 Hb_024758_030 Hb_024758_030 Hb_000307_040--Hb_024758_030 Hb_000907_160 Hb_000907_160 Hb_000307_040--Hb_000907_160 Hb_000563_470 Hb_000563_470 Hb_000307_040--Hb_000563_470 Hb_007632_070 Hb_007632_070 Hb_000307_040--Hb_007632_070 Hb_039222_010 Hb_039222_010 Hb_000307_040--Hb_039222_010 Hb_132840_150 Hb_132840_150 Hb_000307_040--Hb_132840_150 Hb_004918_010 Hb_004918_010 Hb_024758_030--Hb_004918_010 Hb_000347_100 Hb_000347_100 Hb_024758_030--Hb_000347_100 Hb_017043_040 Hb_017043_040 Hb_024758_030--Hb_017043_040 Hb_007885_020 Hb_007885_020 Hb_024758_030--Hb_007885_020 Hb_000639_010 Hb_000639_010 Hb_024758_030--Hb_000639_010 Hb_003050_020 Hb_003050_020 Hb_000907_160--Hb_003050_020 Hb_000190_170 Hb_000190_170 Hb_000907_160--Hb_000190_170 Hb_000003_280 Hb_000003_280 Hb_000907_160--Hb_000003_280 Hb_003894_050 Hb_003894_050 Hb_000907_160--Hb_003894_050 Hb_000959_320 Hb_000959_320 Hb_000907_160--Hb_000959_320 Hb_053264_010 Hb_053264_010 Hb_000907_160--Hb_053264_010 Hb_000563_470--Hb_007632_070 Hb_127839_010 Hb_127839_010 Hb_000563_470--Hb_127839_010 Hb_001863_330 Hb_001863_330 Hb_000563_470--Hb_001863_330 Hb_002224_020 Hb_002224_020 Hb_000563_470--Hb_002224_020 Hb_149882_010 Hb_149882_010 Hb_000563_470--Hb_149882_010 Hb_016333_010 Hb_016333_010 Hb_000563_470--Hb_016333_010 Hb_007632_070--Hb_127839_010 Hb_007632_070--Hb_016333_010 Hb_007632_070--Hb_001863_330 Hb_087992_010 Hb_087992_010 Hb_007632_070--Hb_087992_010 Hb_001140_300 Hb_001140_300 Hb_007632_070--Hb_001140_300 Hb_003894_110 Hb_003894_110 Hb_039222_010--Hb_003894_110 Hb_000005_240 Hb_000005_240 Hb_039222_010--Hb_000005_240 Hb_007218_040 Hb_007218_040 Hb_039222_010--Hb_007218_040 Hb_000483_450 Hb_000483_450 Hb_039222_010--Hb_000483_450 Hb_002411_090 Hb_002411_090 Hb_039222_010--Hb_002411_090 Hb_001021_120 Hb_001021_120 Hb_039222_010--Hb_001021_120 Hb_004117_090 Hb_004117_090 Hb_132840_150--Hb_004117_090 Hb_001105_120 Hb_001105_120 Hb_132840_150--Hb_001105_120 Hb_012518_080 Hb_012518_080 Hb_132840_150--Hb_012518_080 Hb_132840_150--Hb_000190_170 Hb_132840_150--Hb_039222_010 Hb_000003_210 Hb_000003_210 Hb_132840_150--Hb_000003_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.772182 1.20951 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.191899 0 0 0.12869 0.533336

CAGE analysis