Hb_053264_010

Information

Type -
Description -
Location Contig53264: 369-898
Sequence    

Annotation

kegg
ID mtr:MTR_6g078380
description Beta-glucosidase D2
nr
ID ABL01537.1
description beta glucosidase [Hevea brasiliensis]
swissprot
ID Q9FZE0
description Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGLU40 PE=2 SV=1
trembl
ID A1E2C0
description Beta glucosidase OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0004553
description beta glucosidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_053264_010 0.0 - - beta glucosidase [Hevea brasiliensis]
2 Hb_000903_040 0.0614782995 - - PREDICTED: pirin-like protein [Jatropha curcas]
3 Hb_006846_040 0.0624928524 - - PREDICTED: uncharacterized protein LOC105648687 [Jatropha curcas]
4 Hb_000103_450 0.0661283905 - - PREDICTED: dentin sialophosphoprotein-like [Jatropha curcas]
5 Hb_010962_020 0.0794886143 transcription factor TF Family: OFP hypothetical protein RCOM_0815310 [Ricinus communis]
6 Hb_000003_280 0.0808971442 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001047_090 0.082014417 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP16-like [Jatropha curcas]
8 Hb_002471_130 0.0869885343 - - PREDICTED: probable transmembrane ascorbate ferrireductase 3 [Jatropha curcas]
9 Hb_031984_020 0.089943321 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000140_320 0.0930838953 - - delta-8 sphingolipid desaturase [Vernicia fordii]
11 Hb_009783_010 0.0955576348 - - PREDICTED: sulfated surface glycoprotein 185-like [Populus euphratica]
12 Hb_000878_050 0.0957663246 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
13 Hb_010407_130 0.0978692958 - - hypothetical protein POPTR_0008s16680g [Populus trichocarpa]
14 Hb_138585_010 0.099297012 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
15 Hb_005542_120 0.1007469923 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Jatropha curcas]
16 Hb_001898_040 0.1013874126 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
17 Hb_004435_020 0.1013883207 - - PREDICTED: tubulin alpha-2 chain [Jatropha curcas]
18 Hb_000392_110 0.1022740468 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
19 Hb_002902_060 0.1058072744 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
20 Hb_000964_040 0.1070053383 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_053264_010 Hb_053264_010 Hb_000903_040 Hb_000903_040 Hb_053264_010--Hb_000903_040 Hb_006846_040 Hb_006846_040 Hb_053264_010--Hb_006846_040 Hb_000103_450 Hb_000103_450 Hb_053264_010--Hb_000103_450 Hb_010962_020 Hb_010962_020 Hb_053264_010--Hb_010962_020 Hb_000003_280 Hb_000003_280 Hb_053264_010--Hb_000003_280 Hb_001047_090 Hb_001047_090 Hb_053264_010--Hb_001047_090 Hb_000417_210 Hb_000417_210 Hb_000903_040--Hb_000417_210 Hb_000676_230 Hb_000676_230 Hb_000903_040--Hb_000676_230 Hb_000903_040--Hb_006846_040 Hb_138585_010 Hb_138585_010 Hb_000903_040--Hb_138585_010 Hb_009783_010 Hb_009783_010 Hb_000903_040--Hb_009783_010 Hb_006846_040--Hb_000103_450 Hb_006846_040--Hb_001047_090 Hb_006846_040--Hb_138585_010 Hb_006846_040--Hb_010962_020 Hb_010407_130 Hb_010407_130 Hb_000103_450--Hb_010407_130 Hb_004435_020 Hb_004435_020 Hb_000103_450--Hb_004435_020 Hb_000103_450--Hb_001047_090 Hb_012653_050 Hb_012653_050 Hb_000103_450--Hb_012653_050 Hb_010962_020--Hb_001047_090 Hb_002902_060 Hb_002902_060 Hb_010962_020--Hb_002902_060 Hb_001898_040 Hb_001898_040 Hb_010962_020--Hb_001898_040 Hb_001136_160 Hb_001136_160 Hb_010962_020--Hb_001136_160 Hb_010962_020--Hb_000003_280 Hb_000878_050 Hb_000878_050 Hb_000003_280--Hb_000878_050 Hb_000003_280--Hb_000103_450 Hb_000003_280--Hb_001898_040 Hb_000003_280--Hb_006846_040 Hb_004202_020 Hb_004202_020 Hb_001047_090--Hb_004202_020 Hb_001047_090--Hb_002902_060 Hb_000392_110 Hb_000392_110 Hb_001047_090--Hb_000392_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.248553 10.6683 96.0304 234.222 2.44162 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 12.0097 98.5771

CAGE analysis