Hb_024758_030

Information

Type -
Description -
Location Contig24758: 17298-17759
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP41643.1
description hypothetical protein JCGZ_16050 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L350
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16050 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_024758_030 0.0 - - hypothetical protein JCGZ_16050 [Jatropha curcas]
2 Hb_004918_010 0.1266782416 - - protein binding protein, putative [Ricinus communis]
3 Hb_000307_040 0.1671900573 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
4 Hb_000347_100 0.2089403895 transcription factor TF Family: C3H hypothetical protein RCOM_0684740 [Ricinus communis]
5 Hb_017043_040 0.2233105586 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
6 Hb_007885_020 0.2234158816 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
7 Hb_000639_010 0.2250721927 transcription factor TF Family: ERF hypothetical protein JCGZ_09727 [Jatropha curcas]
8 Hb_000340_200 0.2288797676 - - PREDICTED: uncharacterized protein LOC105650039 [Jatropha curcas]
9 Hb_007100_020 0.229010636 - - hypothetical protein POPTR_0473s00220g [Populus trichocarpa]
10 Hb_006978_020 0.2315370048 - - PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X2 [Jatropha curcas]
11 Hb_000941_110 0.2357519419 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
12 Hb_032572_010 0.2407693478 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]
13 Hb_001958_010 0.2421597707 - - hypothetical protein CICLE_v100078532mg, partial [Citrus clementina]
14 Hb_041692_010 0.2424744798 - - annexin [Manihot esculenta]
15 Hb_000189_180 0.2429443454 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
16 Hb_162174_010 0.2431429977 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
17 Hb_002248_010 0.2449812838 - - PREDICTED: uncharacterized protein LOC105124180 [Populus euphratica]
18 Hb_000303_060 0.2455307128 - - o-methyltransferase, putative [Ricinus communis]
19 Hb_000109_140 0.2461146283 - - hypothetical protein CICLE_v100314482mg, partial [Citrus clementina]
20 Hb_009767_060 0.246159035 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]

Gene co-expression network

sample Hb_024758_030 Hb_024758_030 Hb_004918_010 Hb_004918_010 Hb_024758_030--Hb_004918_010 Hb_000307_040 Hb_000307_040 Hb_024758_030--Hb_000307_040 Hb_000347_100 Hb_000347_100 Hb_024758_030--Hb_000347_100 Hb_017043_040 Hb_017043_040 Hb_024758_030--Hb_017043_040 Hb_007885_020 Hb_007885_020 Hb_024758_030--Hb_007885_020 Hb_000639_010 Hb_000639_010 Hb_024758_030--Hb_000639_010 Hb_007100_020 Hb_007100_020 Hb_004918_010--Hb_007100_020 Hb_002601_050 Hb_002601_050 Hb_004918_010--Hb_002601_050 Hb_004918_010--Hb_000307_040 Hb_000077_170 Hb_000077_170 Hb_004918_010--Hb_000077_170 Hb_000866_180 Hb_000866_180 Hb_004918_010--Hb_000866_180 Hb_000907_160 Hb_000907_160 Hb_000307_040--Hb_000907_160 Hb_000563_470 Hb_000563_470 Hb_000307_040--Hb_000563_470 Hb_007632_070 Hb_007632_070 Hb_000307_040--Hb_007632_070 Hb_039222_010 Hb_039222_010 Hb_000307_040--Hb_039222_010 Hb_132840_150 Hb_132840_150 Hb_000307_040--Hb_132840_150 Hb_009767_060 Hb_009767_060 Hb_000347_100--Hb_009767_060 Hb_003580_050 Hb_003580_050 Hb_000347_100--Hb_003580_050 Hb_116647_010 Hb_116647_010 Hb_000347_100--Hb_116647_010 Hb_041692_010 Hb_041692_010 Hb_000347_100--Hb_041692_010 Hb_000416_090 Hb_000416_090 Hb_000347_100--Hb_000416_090 Hb_029639_030 Hb_029639_030 Hb_000347_100--Hb_029639_030 Hb_012655_010 Hb_012655_010 Hb_017043_040--Hb_012655_010 Hb_162174_010 Hb_162174_010 Hb_017043_040--Hb_162174_010 Hb_000109_140 Hb_000109_140 Hb_017043_040--Hb_000109_140 Hb_005731_010 Hb_005731_010 Hb_017043_040--Hb_005731_010 Hb_000941_110 Hb_000941_110 Hb_017043_040--Hb_000941_110 Hb_119443_010 Hb_119443_010 Hb_017043_040--Hb_119443_010 Hb_004346_010 Hb_004346_010 Hb_007885_020--Hb_004346_010 Hb_003688_210 Hb_003688_210 Hb_007885_020--Hb_003688_210 Hb_004545_070 Hb_004545_070 Hb_007885_020--Hb_004545_070 Hb_009767_050 Hb_009767_050 Hb_007885_020--Hb_009767_050 Hb_000668_050 Hb_000668_050 Hb_007885_020--Hb_000668_050 Hb_168561_010 Hb_168561_010 Hb_000639_010--Hb_168561_010 Hb_000635_100 Hb_000635_100 Hb_000639_010--Hb_000635_100 Hb_001277_010 Hb_001277_010 Hb_000639_010--Hb_001277_010 Hb_006499_020 Hb_006499_020 Hb_000639_010--Hb_006499_020 Hb_007101_140 Hb_007101_140 Hb_000639_010--Hb_007101_140 Hb_032572_010 Hb_032572_010 Hb_000639_010--Hb_032572_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.418183 0.487997 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.153319 0 0 0.201935 0.441829

CAGE analysis