Hb_029639_030

Information

Type -
Description -
Location Contig29639: 21607-26508
Sequence    

Annotation

kegg
ID rcu:RCOM_1765120
description phosphatidylinositol-4-phosphate 5-kinase, putative (EC:2.7.1.68)
nr
ID XP_012092522.1
description PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2-like [Jatropha curcas]
swissprot
ID Q56YP2
description Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1
trembl
ID A0A067J9V1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04229 PE=4 SV=1
Gene Ontology
ID GO:0016308
description phosphatidylinositol 4-phosphate 5-kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31008: 21686-26463 , PASA_asmbl_31009: 23733-24115
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029639_030 0.0 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2-like [Jatropha curcas]
2 Hb_000181_220 0.0736738612 - - PREDICTED: MATE efflux family protein LAL5-like isoform X2 [Jatropha curcas]
3 Hb_000152_880 0.0820879897 - - -
4 Hb_033772_060 0.0837351259 - - conserved hypothetical protein [Ricinus communis]
5 Hb_007894_080 0.0887055053 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005892_040 0.0908970616 - - hypothetical protein JCGZ_02368 [Jatropha curcas]
7 Hb_000977_030 0.0921856126 - - unnamed protein product [Vitis vinifera]
8 Hb_007101_140 0.0927790996 - - hypothetical protein JCGZ_21777 [Jatropha curcas]
9 Hb_000951_090 0.0934901296 - - Oligopeptide transporter, putative [Ricinus communis]
10 Hb_001405_040 0.0947808011 - - PREDICTED: 3-ketoacyl-CoA synthase 11-like [Jatropha curcas]
11 Hb_000416_090 0.1002350339 - - Aquaporin NIP1.1, putative [Ricinus communis]
12 Hb_000162_200 0.1020550055 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
13 Hb_002724_010 0.1062176038 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Citrus sinensis]
14 Hb_003506_010 0.1108349541 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
15 Hb_000017_140 0.1109029162 - - polygalacturonase, putative [Ricinus communis]
16 Hb_009767_060 0.1116305121 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
17 Hb_093218_010 0.111698852 - - hypothetical protein POPTR_0001s05220g [Populus trichocarpa]
18 Hb_000290_030 0.1126882757 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
19 Hb_004162_320 0.1147727986 - - PREDICTED: uncharacterized protein LOC105628009 isoform X1 [Jatropha curcas]
20 Hb_000318_010 0.1151301104 - - calcium-dependent protein kinase 6 [Hevea brasiliensis]

Gene co-expression network

sample Hb_029639_030 Hb_029639_030 Hb_000181_220 Hb_000181_220 Hb_029639_030--Hb_000181_220 Hb_000152_880 Hb_000152_880 Hb_029639_030--Hb_000152_880 Hb_033772_060 Hb_033772_060 Hb_029639_030--Hb_033772_060 Hb_007894_080 Hb_007894_080 Hb_029639_030--Hb_007894_080 Hb_005892_040 Hb_005892_040 Hb_029639_030--Hb_005892_040 Hb_000977_030 Hb_000977_030 Hb_029639_030--Hb_000977_030 Hb_000181_220--Hb_033772_060 Hb_007101_140 Hb_007101_140 Hb_000181_220--Hb_007101_140 Hb_000181_220--Hb_007894_080 Hb_001488_350 Hb_001488_350 Hb_000181_220--Hb_001488_350 Hb_001405_040 Hb_001405_040 Hb_000181_220--Hb_001405_040 Hb_000017_140 Hb_000017_140 Hb_000152_880--Hb_000017_140 Hb_000152_880--Hb_007101_140 Hb_000152_880--Hb_007894_080 Hb_000152_880--Hb_033772_060 Hb_027506_030 Hb_027506_030 Hb_000152_880--Hb_027506_030 Hb_033772_060--Hb_007894_080 Hb_093218_010 Hb_093218_010 Hb_033772_060--Hb_093218_010 Hb_033772_060--Hb_005892_040 Hb_007894_080--Hb_000017_140 Hb_007894_080--Hb_007101_140 Hb_000162_200 Hb_000162_200 Hb_007894_080--Hb_000162_200 Hb_003506_010 Hb_003506_010 Hb_005892_040--Hb_003506_010 Hb_004162_320 Hb_004162_320 Hb_005892_040--Hb_004162_320 Hb_026240_020 Hb_026240_020 Hb_005892_040--Hb_026240_020 Hb_005892_040--Hb_001405_040 Hb_020805_070 Hb_020805_070 Hb_005892_040--Hb_020805_070 Hb_005892_040--Hb_000977_030 Hb_000977_030--Hb_026240_020 Hb_000290_030 Hb_000290_030 Hb_000977_030--Hb_000290_030 Hb_003580_050 Hb_003580_050 Hb_000977_030--Hb_003580_050 Hb_000977_030--Hb_000162_200 Hb_002724_010 Hb_002724_010 Hb_000977_030--Hb_002724_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0652593 1.64798 9.35193 12.1836 0.0125765 0.0187482
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0719545 0.0916891 5.23362 9.58677

CAGE analysis