Hb_012655_010

Information

Type -
Description -
Location Contig12655: 15637-15939
Sequence    

Annotation

kegg
ID pop:POPTR_0125s00200g
description hypothetical protein
nr
ID KDP35623.1
description hypothetical protein JCGZ_09061 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKU4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09061 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08010: 15631-15978
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012655_010 0.0 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
2 Hb_005731_010 0.0320909443 - - hypothetical protein VITISV_030941 [Vitis vinifera]
3 Hb_004076_060 0.0678381376 - - PREDICTED: UDP-glycosyltransferase 82A1 [Jatropha curcas]
4 Hb_000941_110 0.0835114452 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
5 Hb_017043_040 0.0837774163 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
6 Hb_000109_140 0.0903866189 - - hypothetical protein CICLE_v100314482mg, partial [Citrus clementina]
7 Hb_004204_060 0.0932371071 transcription factor TF Family: NAC NAC transcription factor 058, partial [Jatropha curcas]
8 Hb_162174_010 0.0949118401 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
9 Hb_005018_010 0.0952421109 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
10 Hb_000189_180 0.0993008001 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
11 Hb_002391_030 0.1009308685 - - hypothetical protein CISIN_1g020187mg [Citrus sinensis]
12 Hb_001958_010 0.1061560517 - - hypothetical protein CICLE_v100078532mg, partial [Citrus clementina]
13 Hb_001516_010 0.1116356413 - - PREDICTED: guanylate kinase 2 [Jatropha curcas]
14 Hb_007850_020 0.1126355122 - - conserved hypothetical protein [Ricinus communis]
15 Hb_010743_010 0.1254088674 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
16 Hb_003911_050 0.1267557203 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
17 Hb_000985_160 0.1270668877 - - PREDICTED: cytochrome P450 724B1-like [Jatropha curcas]
18 Hb_005535_070 0.1278731789 - - conserved hypothetical protein [Ricinus communis]
19 Hb_127263_010 0.1285245932 - - hypothetical protein JCGZ_02828 [Jatropha curcas]
20 Hb_006938_060 0.1292050602 - - nutrient reservoir, putative [Ricinus communis]

Gene co-expression network

sample Hb_012655_010 Hb_012655_010 Hb_005731_010 Hb_005731_010 Hb_012655_010--Hb_005731_010 Hb_004076_060 Hb_004076_060 Hb_012655_010--Hb_004076_060 Hb_000941_110 Hb_000941_110 Hb_012655_010--Hb_000941_110 Hb_017043_040 Hb_017043_040 Hb_012655_010--Hb_017043_040 Hb_000109_140 Hb_000109_140 Hb_012655_010--Hb_000109_140 Hb_004204_060 Hb_004204_060 Hb_012655_010--Hb_004204_060 Hb_005731_010--Hb_004076_060 Hb_000189_180 Hb_000189_180 Hb_005731_010--Hb_000189_180 Hb_005731_010--Hb_000109_140 Hb_005731_010--Hb_000941_110 Hb_001958_010 Hb_001958_010 Hb_005731_010--Hb_001958_010 Hb_004076_060--Hb_001958_010 Hb_004076_060--Hb_000189_180 Hb_004076_060--Hb_000941_110 Hb_004076_060--Hb_000109_140 Hb_000941_110--Hb_001958_010 Hb_003911_050 Hb_003911_050 Hb_000941_110--Hb_003911_050 Hb_005018_010 Hb_005018_010 Hb_000941_110--Hb_005018_010 Hb_162174_010 Hb_162174_010 Hb_017043_040--Hb_162174_010 Hb_017043_040--Hb_000109_140 Hb_017043_040--Hb_005731_010 Hb_017043_040--Hb_000941_110 Hb_119443_010 Hb_119443_010 Hb_017043_040--Hb_119443_010 Hb_000109_140--Hb_000189_180 Hb_000109_140--Hb_001958_010 Hb_003894_170 Hb_003894_170 Hb_000109_140--Hb_003894_170 Hb_007850_020 Hb_007850_020 Hb_004204_060--Hb_007850_020 Hb_000985_160 Hb_000985_160 Hb_004204_060--Hb_000985_160 Hb_012035_010 Hb_012035_010 Hb_004204_060--Hb_012035_010 Hb_000152_350 Hb_000152_350 Hb_004204_060--Hb_000152_350 Hb_002078_330 Hb_002078_330 Hb_004204_060--Hb_002078_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.45698 1.08514 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.266499 1.33939

CAGE analysis