Hb_009767_050

Information

Type -
Description -
Location Contig9767: 39767-45248
Sequence    

Annotation

kegg
ID rcu:RCOM_0912250
description 5'-nucleotidase surE, putative (EC:3.1.3.5)
nr
ID XP_012069616.1
description PREDICTED: uncharacterized protein LOC105631978 isoform X1 [Jatropha curcas]
swissprot
ID B2VA83
description 5'-nucleotidase SurE OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=surE PE=3 SV=1
trembl
ID A0A067KVJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02165 PE=3 SV=1
Gene Ontology
ID GO:0005829
description 5 -nucleotidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64112: 39650-45159 , PASA_asmbl_64113: 40961-41090
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009767_050 0.0 - - PREDICTED: uncharacterized protein LOC105631978 isoform X1 [Jatropha curcas]
2 Hb_002025_380 0.1161088844 - - Uncharacterized protein TCM_011176 [Theobroma cacao]
3 Hb_002818_170 0.1161827299 - - hypothetical protein POPTR_0014s10650g [Populus trichocarpa]
4 Hb_002072_040 0.1173678327 - - PREDICTED: uncharacterized protein LOC105630881 [Jatropha curcas]
5 Hb_002097_180 0.1235378137 - - PREDICTED: probable pectate lyase 12 isoform X1 [Jatropha curcas]
6 Hb_003189_010 0.1290730903 - - hypothetical protein EUGRSUZ_G02605 [Eucalyptus grandis]
7 Hb_006277_030 0.1294338533 - - conserved hypothetical protein [Ricinus communis]
8 Hb_006501_100 0.1300996845 - - malic enzyme, putative [Ricinus communis]
9 Hb_000749_120 0.1414969469 - - PREDICTED: uncharacterized protein LOC105644255 isoform X2 [Jatropha curcas]
10 Hb_004545_070 0.1420719628 - - PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Jatropha curcas]
11 Hb_000668_050 0.1462323634 - - phosphoglycerate mutase, putative [Ricinus communis]
12 Hb_000011_370 0.1529576026 - - PREDICTED: uncharacterized protein LOC105631333 [Jatropha curcas]
13 Hb_005144_080 0.1556052355 - - Serine carboxypeptidase, putative [Ricinus communis]
14 Hb_000956_070 0.1571467397 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
15 Hb_004282_010 0.1578173177 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
16 Hb_164926_040 0.1594570433 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
17 Hb_022250_160 0.1609129863 - - respiratory burst oxidase A [Manihot esculenta]
18 Hb_005731_070 0.1619796635 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002339_030 0.1645649066 - - o-methyltransferase, putative [Ricinus communis]
20 Hb_000014_080 0.1649341675 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_009767_050 Hb_009767_050 Hb_002025_380 Hb_002025_380 Hb_009767_050--Hb_002025_380 Hb_002818_170 Hb_002818_170 Hb_009767_050--Hb_002818_170 Hb_002072_040 Hb_002072_040 Hb_009767_050--Hb_002072_040 Hb_002097_180 Hb_002097_180 Hb_009767_050--Hb_002097_180 Hb_003189_010 Hb_003189_010 Hb_009767_050--Hb_003189_010 Hb_006277_030 Hb_006277_030 Hb_009767_050--Hb_006277_030 Hb_002025_380--Hb_006277_030 Hb_002025_380--Hb_003189_010 Hb_002025_380--Hb_002818_170 Hb_002025_380--Hb_002097_180 Hb_005144_080 Hb_005144_080 Hb_002025_380--Hb_005144_080 Hb_006501_100 Hb_006501_100 Hb_002025_380--Hb_006501_100 Hb_002818_170--Hb_006277_030 Hb_002818_170--Hb_003189_010 Hb_002818_170--Hb_002097_180 Hb_002818_170--Hb_006501_100 Hb_004282_010 Hb_004282_010 Hb_002818_170--Hb_004282_010 Hb_002072_040--Hb_002025_380 Hb_005168_020 Hb_005168_020 Hb_002072_040--Hb_005168_020 Hb_002072_040--Hb_006277_030 Hb_002072_040--Hb_003189_010 Hb_005731_070 Hb_005731_070 Hb_002072_040--Hb_005731_070 Hb_002097_180--Hb_003189_010 Hb_002097_180--Hb_006501_100 Hb_002097_180--Hb_006277_030 Hb_009615_030 Hb_009615_030 Hb_002097_180--Hb_009615_030 Hb_003189_010--Hb_006277_030 Hb_003189_010--Hb_005731_070 Hb_000668_050 Hb_000668_050 Hb_003189_010--Hb_000668_050 Hb_006277_030--Hb_006501_100 Hb_006277_030--Hb_004282_010 Hb_006277_030--Hb_005144_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.21823 12.2285 25.0554 0 0.16595
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.389903 0.697109 0.782319 21.6946 6.32752

CAGE analysis