Hb_007632_070

Information

Type -
Description -
Location Contig7632: 61300-63276
Sequence    

Annotation

kegg
ID rcu:RCOM_0521610
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002522736.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9FHG4
description Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1
trembl
ID B9S9R7
description Kinase, putative OS=Ricinus communis GN=RCOM_0521610 PE=3 SV=1
Gene Ontology
ID GO:0005622
description probable l-type lectin-domain containing receptor kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57345: 61576-62115 , PASA_asmbl_57346: 62757-63207
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007632_070 0.0 - - kinase, putative [Ricinus communis]
2 Hb_127839_010 0.0630506627 - - hypothetical protein PRUPE_ppa000956mg [Prunus persica]
3 Hb_000563_470 0.0650430884 - - PREDICTED: uncharacterized protein LOC105643461 [Jatropha curcas]
4 Hb_016333_010 0.0664585322 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
5 Hb_001863_330 0.0798935565 - - RNA-binding region-containing protein, putative [Ricinus communis]
6 Hb_087992_010 0.0825847618 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
7 Hb_001140_300 0.0834116047 - - PREDICTED: tubulin beta-1 chain [Cicer arietinum]
8 Hb_002224_020 0.1012753986 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
9 Hb_007218_040 0.1049490466 - - Leucine-rich repeat transmembrane protein kinase protein, putative [Theobroma cacao]
10 Hb_149882_010 0.1066008845 - - PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica]
11 Hb_039222_010 0.1076572097 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Jatropha curcas]
12 Hb_032572_010 0.1117592171 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]
13 Hb_001958_010 0.1123555945 - - hypothetical protein CICLE_v100078532mg, partial [Citrus clementina]
14 Hb_004037_040 0.1125588136 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
15 Hb_005181_170 0.1142302361 - - PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
16 Hb_000189_180 0.1255141679 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
17 Hb_111985_100 0.1260616901 - - beta-galactosidase, putative [Ricinus communis]
18 Hb_085962_010 0.1267728046 - - hypothetical protein POPTR_0017s11380g [Populus trichocarpa]
19 Hb_001047_090 0.1276776852 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP16-like [Jatropha curcas]
20 Hb_174639_010 0.1285629178 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_007632_070 Hb_007632_070 Hb_127839_010 Hb_127839_010 Hb_007632_070--Hb_127839_010 Hb_000563_470 Hb_000563_470 Hb_007632_070--Hb_000563_470 Hb_016333_010 Hb_016333_010 Hb_007632_070--Hb_016333_010 Hb_001863_330 Hb_001863_330 Hb_007632_070--Hb_001863_330 Hb_087992_010 Hb_087992_010 Hb_007632_070--Hb_087992_010 Hb_001140_300 Hb_001140_300 Hb_007632_070--Hb_001140_300 Hb_127839_010--Hb_016333_010 Hb_127839_010--Hb_087992_010 Hb_149882_010 Hb_149882_010 Hb_127839_010--Hb_149882_010 Hb_127839_010--Hb_001863_330 Hb_002224_020 Hb_002224_020 Hb_127839_010--Hb_002224_020 Hb_000563_470--Hb_127839_010 Hb_000563_470--Hb_001863_330 Hb_000563_470--Hb_002224_020 Hb_000563_470--Hb_149882_010 Hb_000563_470--Hb_016333_010 Hb_016333_010--Hb_001863_330 Hb_016333_010--Hb_087992_010 Hb_001958_010 Hb_001958_010 Hb_016333_010--Hb_001958_010 Hb_004037_040 Hb_004037_040 Hb_016333_010--Hb_004037_040 Hb_001863_330--Hb_087992_010 Hb_001863_330--Hb_002224_020 Hb_000185_180 Hb_000185_180 Hb_001863_330--Hb_000185_180 Hb_087992_010--Hb_002224_020 Hb_087992_010--Hb_149882_010 Hb_007218_040 Hb_007218_040 Hb_001140_300--Hb_007218_040 Hb_025787_020 Hb_025787_020 Hb_001140_300--Hb_025787_020 Hb_001056_040 Hb_001056_040 Hb_001140_300--Hb_001056_040 Hb_005181_170 Hb_005181_170 Hb_001140_300--Hb_005181_170 Hb_001396_030 Hb_001396_030 Hb_001140_300--Hb_001396_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0100578 0.00997781 2.62205 3.9487 0 0.00968648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.02286 0 0 0.415091 1.44399

CAGE analysis