Hb_003894_050

Information

Type -
Description -
Location Contig3894: 36633-37558
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa014786mg
description hypothetical protein
nr
ID KDP28753.1
description hypothetical protein JCGZ_14524 [Jatropha curcas]
swissprot
ID Q8L7W5
description Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana GN=SMO1-1 PE=1 SV=1
trembl
ID A0A067K163
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14524 PE=4 SV=1
Gene Ontology
ID GO:0016021
description methylsterol monooxygenase 1-1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39022: 36631-37838
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003894_050 0.0 - - hypothetical protein JCGZ_14524 [Jatropha curcas]
2 Hb_003544_080 0.1342731466 - - Protein HVA22, putative [Ricinus communis]
3 Hb_000907_160 0.1378425547 - - calcineurin-like phosphoesterase [Manihot esculenta]
4 Hb_002783_100 0.1543664095 - - Zeamatin precursor, putative [Ricinus communis]
5 Hb_001898_040 0.1584738755 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
6 Hb_001663_060 0.1628617825 - - ribonuclease t2, putative [Ricinus communis]
7 Hb_001136_160 0.1633073882 - - catalytic, putative [Ricinus communis]
8 Hb_000317_380 0.1679378186 - - Peroxidase 47 precursor, putative [Ricinus communis]
9 Hb_162472_010 0.1681404732 - - conserved hypothetical protein [Ricinus communis]
10 Hb_015292_020 0.1682020305 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
11 Hb_003050_020 0.1685764003 - - glycosyl hydrolase family 17 family protein [Populus trichocarpa]
12 Hb_007122_020 0.1687478166 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
13 Hb_001975_110 0.1711229463 - - -
14 Hb_002783_280 0.1729256989 - - PREDICTED: WEB family protein At1g75720 [Jatropha curcas]
15 Hb_000003_280 0.1730822075 - - conserved hypothetical protein [Ricinus communis]
16 Hb_012132_050 0.1735338564 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]
17 Hb_002184_080 0.174851824 - - triacylglycerol lipase, putative [Ricinus communis]
18 Hb_000085_410 0.1751424954 - - hypothetical protein POPTR_0011s09040g [Populus trichocarpa]
19 Hb_002471_130 0.1757889088 - - PREDICTED: probable transmembrane ascorbate ferrireductase 3 [Jatropha curcas]
20 Hb_002902_060 0.1773214765 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]

Gene co-expression network

sample Hb_003894_050 Hb_003894_050 Hb_003544_080 Hb_003544_080 Hb_003894_050--Hb_003544_080 Hb_000907_160 Hb_000907_160 Hb_003894_050--Hb_000907_160 Hb_002783_100 Hb_002783_100 Hb_003894_050--Hb_002783_100 Hb_001898_040 Hb_001898_040 Hb_003894_050--Hb_001898_040 Hb_001663_060 Hb_001663_060 Hb_003894_050--Hb_001663_060 Hb_001136_160 Hb_001136_160 Hb_003894_050--Hb_001136_160 Hb_006153_140 Hb_006153_140 Hb_003544_080--Hb_006153_140 Hb_003544_080--Hb_002783_100 Hb_000317_380 Hb_000317_380 Hb_003544_080--Hb_000317_380 Hb_003680_240 Hb_003680_240 Hb_003544_080--Hb_003680_240 Hb_002686_220 Hb_002686_220 Hb_003544_080--Hb_002686_220 Hb_002067_070 Hb_002067_070 Hb_003544_080--Hb_002067_070 Hb_003050_020 Hb_003050_020 Hb_000907_160--Hb_003050_020 Hb_000190_170 Hb_000190_170 Hb_000907_160--Hb_000190_170 Hb_000003_280 Hb_000003_280 Hb_000907_160--Hb_000003_280 Hb_000959_320 Hb_000959_320 Hb_000907_160--Hb_000959_320 Hb_053264_010 Hb_053264_010 Hb_000907_160--Hb_053264_010 Hb_002783_100--Hb_000317_380 Hb_000005_290 Hb_000005_290 Hb_002783_100--Hb_000005_290 Hb_001975_110 Hb_001975_110 Hb_002783_100--Hb_001975_110 Hb_050898_040 Hb_050898_040 Hb_002783_100--Hb_050898_040 Hb_002309_020 Hb_002309_020 Hb_002783_100--Hb_002309_020 Hb_004162_200 Hb_004162_200 Hb_002783_100--Hb_004162_200 Hb_001898_040--Hb_001136_160 Hb_009783_010 Hb_009783_010 Hb_001898_040--Hb_009783_010 Hb_010962_020 Hb_010962_020 Hb_001898_040--Hb_010962_020 Hb_001136_040 Hb_001136_040 Hb_001898_040--Hb_001136_040 Hb_012132_050 Hb_012132_050 Hb_001898_040--Hb_012132_050 Hb_007185_050 Hb_007185_050 Hb_001898_040--Hb_007185_050 Hb_000020_200 Hb_000020_200 Hb_001663_060--Hb_000020_200 Hb_001079_050 Hb_001079_050 Hb_001663_060--Hb_001079_050 Hb_000011_280 Hb_000011_280 Hb_001663_060--Hb_000011_280 Hb_003607_080 Hb_003607_080 Hb_001663_060--Hb_003607_080 Hb_003466_010 Hb_003466_010 Hb_001663_060--Hb_003466_010 Hb_005648_020 Hb_005648_020 Hb_001663_060--Hb_005648_020 Hb_001136_160--Hb_001136_040 Hb_001136_160--Hb_009783_010 Hb_007122_020 Hb_007122_020 Hb_001136_160--Hb_007122_020 Hb_001136_160--Hb_010962_020 Hb_001136_160--Hb_012132_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.275741 1.38182 3.77948 0 0.106037
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.267547 0 0 0.0436813 0.982791

CAGE analysis