Hb_000020_200

Information

Type -
Description -
Location Contig20: 373877-374422
Sequence    

Annotation

kegg
ID mdm:103412911
description UDP-glycosyltransferase 87A1-like
nr
ID KCW83504.1
description hypothetical protein EUGRSUZ_B00411 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059CZ73
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00411 PE=4 SV=1
Gene Ontology
ID GO:0047215
description udp-glycosyltransferase 87a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20174: 373910-388003
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000020_200 0.0 - - hypothetical protein EUGRSUZ_B00411 [Eucalyptus grandis]
2 Hb_001663_060 0.0807387329 - - ribonuclease t2, putative [Ricinus communis]
3 Hb_000849_030 0.0951874417 - - PREDICTED: fimbrin-2 [Jatropha curcas]
4 Hb_003466_010 0.1008512096 - - PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Jatropha curcas]
5 Hb_008021_050 0.1021085765 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_036520_030 0.1082763256 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
7 Hb_000457_120 0.1097457586 - - PREDICTED: death-associated protein kinase dapk-1 [Jatropha curcas]
8 Hb_029791_010 0.1116350502 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
9 Hb_003607_080 0.1134214152 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
10 Hb_001079_050 0.1158620441 - - Calmodulin, putative [Ricinus communis]
11 Hb_001936_120 0.1164307853 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
12 Hb_122951_010 0.11886101 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
13 Hb_000093_010 0.1221754055 - - Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
14 Hb_133492_010 0.1256038786 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_001688_030 0.1271235881 - - hypothetical protein JCGZ_10716 [Jatropha curcas]
16 Hb_004032_290 0.1277721813 - - protein binding protein, putative [Ricinus communis]
17 Hb_001110_060 0.128588467 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
18 Hb_002388_070 0.1310394794 - - ring finger protein, putative [Ricinus communis]
19 Hb_001408_080 0.1317535289 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
20 Hb_005648_020 0.1332751456 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]

Gene co-expression network

sample Hb_000020_200 Hb_000020_200 Hb_001663_060 Hb_001663_060 Hb_000020_200--Hb_001663_060 Hb_000849_030 Hb_000849_030 Hb_000020_200--Hb_000849_030 Hb_003466_010 Hb_003466_010 Hb_000020_200--Hb_003466_010 Hb_008021_050 Hb_008021_050 Hb_000020_200--Hb_008021_050 Hb_036520_030 Hb_036520_030 Hb_000020_200--Hb_036520_030 Hb_000457_120 Hb_000457_120 Hb_000020_200--Hb_000457_120 Hb_001079_050 Hb_001079_050 Hb_001663_060--Hb_001079_050 Hb_000011_280 Hb_000011_280 Hb_001663_060--Hb_000011_280 Hb_003607_080 Hb_003607_080 Hb_001663_060--Hb_003607_080 Hb_001663_060--Hb_003466_010 Hb_005648_020 Hb_005648_020 Hb_001663_060--Hb_005648_020 Hb_001408_080 Hb_001408_080 Hb_000849_030--Hb_001408_080 Hb_000849_030--Hb_003466_010 Hb_000849_030--Hb_036520_030 Hb_122951_010 Hb_122951_010 Hb_000849_030--Hb_122951_010 Hb_001427_100 Hb_001427_100 Hb_000849_030--Hb_001427_100 Hb_103225_030 Hb_103225_030 Hb_000849_030--Hb_103225_030 Hb_003466_010--Hb_005648_020 Hb_000093_010 Hb_000093_010 Hb_003466_010--Hb_000093_010 Hb_000866_130 Hb_000866_130 Hb_003466_010--Hb_000866_130 Hb_003466_010--Hb_036520_030 Hb_012132_050 Hb_012132_050 Hb_003466_010--Hb_012132_050 Hb_003466_010--Hb_008021_050 Hb_008021_050--Hb_003607_080 Hb_008021_050--Hb_000093_010 Hb_001688_030 Hb_001688_030 Hb_008021_050--Hb_001688_030 Hb_120040_010 Hb_120040_010 Hb_008021_050--Hb_120040_010 Hb_007919_010 Hb_007919_010 Hb_008021_050--Hb_007919_010 Hb_004032_290 Hb_004032_290 Hb_036520_030--Hb_004032_290 Hb_036520_030--Hb_001408_080 Hb_036520_030--Hb_001427_100 Hb_002874_200 Hb_002874_200 Hb_036520_030--Hb_002874_200 Hb_010164_030 Hb_010164_030 Hb_036520_030--Hb_010164_030 Hb_000928_200 Hb_000928_200 Hb_000457_120--Hb_000928_200 Hb_001936_120 Hb_001936_120 Hb_000457_120--Hb_001936_120 Hb_029791_010 Hb_029791_010 Hb_000457_120--Hb_029791_010 Hb_005305_040 Hb_005305_040 Hb_000457_120--Hb_005305_040 Hb_002759_030 Hb_002759_030 Hb_000457_120--Hb_002759_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.907497 1.10158 4.96263 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.116577 0 0 0.264614 1.395

CAGE analysis