Hb_036520_030

Information

Type -
Description -
Location Contig36520: 22149-23549
Sequence    

Annotation

kegg
ID pop:POPTR_0006s23930g
description POPTRDRAFT_763199; hypothetical protein
nr
ID XP_012077219.1
description PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KD31
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07618 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036520_030 0.0 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
2 Hb_004032_290 0.0651579603 - - protein binding protein, putative [Ricinus communis]
3 Hb_001408_080 0.0806307241 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
4 Hb_001427_100 0.081336904 - - acc synthase, putative [Ricinus communis]
5 Hb_002874_200 0.0814450956 - - PREDICTED: uncharacterized protein LOC105109832 [Populus euphratica]
6 Hb_003466_010 0.0847369304 - - PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Jatropha curcas]
7 Hb_010164_030 0.0849392376 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
8 Hb_001136_040 0.0855547162 - - amino acid transporter, putative [Ricinus communis]
9 Hb_003032_110 0.086637864 - - -
10 Hb_005741_030 0.0882766069 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
11 Hb_000849_030 0.0885004266 - - PREDICTED: fimbrin-2 [Jatropha curcas]
12 Hb_001110_060 0.0907793947 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
13 Hb_011381_050 0.0913142632 - - PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
14 Hb_000230_410 0.0931203017 - - PREDICTED: uncharacterized protein LOC105631891 [Jatropha curcas]
15 Hb_007185_050 0.0932375507 - - hypothetical protein JCGZ_22475 [Jatropha curcas]
16 Hb_002388_070 0.0935007813 - - ring finger protein, putative [Ricinus communis]
17 Hb_001936_120 0.0938338764 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
18 Hb_147006_010 0.0958048465 - - receptor like protein 35 [Arabidopsis thaliana]
19 Hb_000866_130 0.0985507872 - - hypothetical protein JCGZ_14397 [Jatropha curcas]
20 Hb_012132_050 0.1000563528 - - PREDICTED: aspartic proteinase PCS1 [Jatropha curcas]

Gene co-expression network

sample Hb_036520_030 Hb_036520_030 Hb_004032_290 Hb_004032_290 Hb_036520_030--Hb_004032_290 Hb_001408_080 Hb_001408_080 Hb_036520_030--Hb_001408_080 Hb_001427_100 Hb_001427_100 Hb_036520_030--Hb_001427_100 Hb_002874_200 Hb_002874_200 Hb_036520_030--Hb_002874_200 Hb_003466_010 Hb_003466_010 Hb_036520_030--Hb_003466_010 Hb_010164_030 Hb_010164_030 Hb_036520_030--Hb_010164_030 Hb_004032_290--Hb_002874_200 Hb_007185_050 Hb_007185_050 Hb_004032_290--Hb_007185_050 Hb_000676_230 Hb_000676_230 Hb_004032_290--Hb_000676_230 Hb_000395_310 Hb_000395_310 Hb_004032_290--Hb_000395_310 Hb_000230_410 Hb_000230_410 Hb_004032_290--Hb_000230_410 Hb_001110_060 Hb_001110_060 Hb_001408_080--Hb_001110_060 Hb_000849_030 Hb_000849_030 Hb_001408_080--Hb_000849_030 Hb_001408_080--Hb_001427_100 Hb_005111_020 Hb_005111_020 Hb_001408_080--Hb_005111_020 Hb_012132_050 Hb_012132_050 Hb_001408_080--Hb_012132_050 Hb_039946_060 Hb_039946_060 Hb_001427_100--Hb_039946_060 Hb_001427_100--Hb_005111_020 Hb_001427_100--Hb_010164_030 Hb_000020_210 Hb_000020_210 Hb_001427_100--Hb_000020_210 Hb_000012_350 Hb_000012_350 Hb_001427_100--Hb_000012_350 Hb_002874_200--Hb_000230_410 Hb_002388_070 Hb_002388_070 Hb_002874_200--Hb_002388_070 Hb_002874_200--Hb_000395_310 Hb_002874_200--Hb_007185_050 Hb_001136_040 Hb_001136_040 Hb_002874_200--Hb_001136_040 Hb_005648_020 Hb_005648_020 Hb_003466_010--Hb_005648_020 Hb_000093_010 Hb_000093_010 Hb_003466_010--Hb_000093_010 Hb_000866_130 Hb_000866_130 Hb_003466_010--Hb_000866_130 Hb_003466_010--Hb_012132_050 Hb_008021_050 Hb_008021_050 Hb_003466_010--Hb_008021_050 Hb_147006_010 Hb_147006_010 Hb_010164_030--Hb_147006_010 Hb_003054_070 Hb_003054_070 Hb_010164_030--Hb_003054_070 Hb_010164_030--Hb_000012_350 Hb_001117_050 Hb_001117_050 Hb_010164_030--Hb_001117_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0811669 0.124513 0.459014 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0106233 0.166373

CAGE analysis