Hb_147006_010

Information

Type -
Description -
Location Contig147006: 335-935
Sequence    

Annotation

kegg
ID ath:AT3G11080
description RLP35; receptor like protein 35
nr
ID NP_187719.1
description receptor like protein 35 [Arabidopsis thaliana]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID Q9SRL7
description Disease resistance protein, putative; 7647-10478 OS=Arabidopsis thaliana GN=F9F8.11 PE=4 SV=1
Gene Ontology
ID GO:0016023
description receptor like protein 35

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_147006_010 0.0 - - receptor like protein 35 [Arabidopsis thaliana]
2 Hb_010164_030 0.0506433139 - - PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Jatropha curcas]
3 Hb_000620_040 0.0657379917 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
4 Hb_133974_010 0.0788253557 - - PREDICTED: glucan endo-1,3-beta-glucosidase 3-like isoform X2 [Populus euphratica]
5 Hb_003032_030 0.0799134217 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
6 Hb_015934_090 0.0891175404 - - PREDICTED: uncharacterized protein LOC105640158 [Jatropha curcas]
7 Hb_004032_290 0.0914846114 - - protein binding protein, putative [Ricinus communis]
8 Hb_003054_070 0.0949849817 transcription factor TF Family: Orphans DNA binding protein, putative [Ricinus communis]
9 Hb_009522_010 0.0955766551 - - hypothetical protein POPTR_0006s18790g [Populus trichocarpa]
10 Hb_036520_030 0.0958048465 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
11 Hb_004650_120 0.0983991829 - - PREDICTED: auxin transporter-like protein 3 [Jatropha curcas]
12 Hb_008221_200 0.1003584957 - - PREDICTED: protein trichome birefringence-like 41 [Jatropha curcas]
13 Hb_002986_030 0.1008554344 - - hypothetical protein JCGZ_12380 [Jatropha curcas]
14 Hb_009620_110 0.1015516939 - - -
15 Hb_000009_280 0.102081552 - - Calmodulin, putative [Ricinus communis]
16 Hb_007185_050 0.1026943116 - - hypothetical protein JCGZ_22475 [Jatropha curcas]
17 Hb_000364_090 0.1028068957 - - PREDICTED: filament-like plant protein 7 isoform X2 [Jatropha curcas]
18 Hb_020375_010 0.1047117366 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
19 Hb_002073_270 0.1066761215 desease resistance Gene Name: TIR PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
20 Hb_009023_010 0.1075954682 - - glycosyl hydrolase family 31 family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_147006_010 Hb_147006_010 Hb_010164_030 Hb_010164_030 Hb_147006_010--Hb_010164_030 Hb_000620_040 Hb_000620_040 Hb_147006_010--Hb_000620_040 Hb_133974_010 Hb_133974_010 Hb_147006_010--Hb_133974_010 Hb_003032_030 Hb_003032_030 Hb_147006_010--Hb_003032_030 Hb_015934_090 Hb_015934_090 Hb_147006_010--Hb_015934_090 Hb_004032_290 Hb_004032_290 Hb_147006_010--Hb_004032_290 Hb_003054_070 Hb_003054_070 Hb_010164_030--Hb_003054_070 Hb_000012_350 Hb_000012_350 Hb_010164_030--Hb_000012_350 Hb_001427_100 Hb_001427_100 Hb_010164_030--Hb_001427_100 Hb_001117_050 Hb_001117_050 Hb_010164_030--Hb_001117_050 Hb_036520_030 Hb_036520_030 Hb_010164_030--Hb_036520_030 Hb_000620_040--Hb_003032_030 Hb_000620_040--Hb_015934_090 Hb_003893_130 Hb_003893_130 Hb_000620_040--Hb_003893_130 Hb_000620_040--Hb_010164_030 Hb_020375_010 Hb_020375_010 Hb_000620_040--Hb_020375_010 Hb_002973_050 Hb_002973_050 Hb_133974_010--Hb_002973_050 Hb_005711_030 Hb_005711_030 Hb_133974_010--Hb_005711_030 Hb_000676_230 Hb_000676_230 Hb_133974_010--Hb_000676_230 Hb_004917_020 Hb_004917_020 Hb_133974_010--Hb_004917_020 Hb_133974_010--Hb_004032_290 Hb_003032_030--Hb_015934_090 Hb_003032_030--Hb_020375_010 Hb_009023_010 Hb_009023_010 Hb_003032_030--Hb_009023_010 Hb_000749_300 Hb_000749_300 Hb_003032_030--Hb_000749_300 Hb_015934_090--Hb_000749_300 Hb_163950_050 Hb_163950_050 Hb_015934_090--Hb_163950_050 Hb_002986_030 Hb_002986_030 Hb_015934_090--Hb_002986_030 Hb_002874_200 Hb_002874_200 Hb_004032_290--Hb_002874_200 Hb_004032_290--Hb_036520_030 Hb_007185_050 Hb_007185_050 Hb_004032_290--Hb_007185_050 Hb_004032_290--Hb_000676_230 Hb_000395_310 Hb_000395_310 Hb_004032_290--Hb_000395_310 Hb_000230_410 Hb_000230_410 Hb_004032_290--Hb_000230_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.12615 2.16842 6.04708 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.176348 3.78293

CAGE analysis