Hb_148209_040

Information

Type -
Description -
Location Contig148209: 37105-37523
Sequence    

Annotation

kegg
ID rcu:RCOM_0937130
description hypothetical protein
nr
ID XP_002519075.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RZA6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0937130 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148209_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001310_040 0.185957814 transcription factor TF Family: TAZ transcription cofactor, putative [Ricinus communis]
3 Hb_000649_040 0.2430348288 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]
4 Hb_000107_350 0.2589204929 - - PREDICTED: uncharacterized protein LOC105635576 [Jatropha curcas]
5 Hb_024758_030 0.2631802826 - - hypothetical protein JCGZ_16050 [Jatropha curcas]
6 Hb_000920_160 0.2696411247 - - annexin [Manihot esculenta]
7 Hb_000307_040 0.2749602201 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
8 Hb_000529_010 0.2751939006 - - cyclin d, putative [Ricinus communis]
9 Hb_000108_240 0.2788787883 - - hypothetical protein Csa_1G600150 [Cucumis sativus]
10 Hb_004918_010 0.2797892608 - - protein binding protein, putative [Ricinus communis]
11 Hb_007416_100 0.2807904748 - - PREDICTED: probable xyloglucan glycosyltransferase 5 [Jatropha curcas]
12 Hb_005470_030 0.2817932988 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 isoform X2 [Jatropha curcas]
13 Hb_000328_010 0.2826865148 - - PREDICTED: QWRF motif-containing protein 8-like [Jatropha curcas]
14 Hb_004055_020 0.2829690039 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
15 Hb_003935_070 0.283133342 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
16 Hb_000477_040 0.2842453211 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000300_480 0.2880532885 - - hypothetical protein RCOM_1321910 [Ricinus communis]
18 Hb_005563_010 0.2896610887 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
19 Hb_005548_060 0.2905731643 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000193_340 0.2919226322 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_148209_040 Hb_148209_040 Hb_001310_040 Hb_001310_040 Hb_148209_040--Hb_001310_040 Hb_000649_040 Hb_000649_040 Hb_148209_040--Hb_000649_040 Hb_000107_350 Hb_000107_350 Hb_148209_040--Hb_000107_350 Hb_024758_030 Hb_024758_030 Hb_148209_040--Hb_024758_030 Hb_000920_160 Hb_000920_160 Hb_148209_040--Hb_000920_160 Hb_000307_040 Hb_000307_040 Hb_148209_040--Hb_000307_040 Hb_143748_010 Hb_143748_010 Hb_001310_040--Hb_143748_010 Hb_000094_200 Hb_000094_200 Hb_001310_040--Hb_000094_200 Hb_000477_040 Hb_000477_040 Hb_001310_040--Hb_000477_040 Hb_000210_100 Hb_000210_100 Hb_001310_040--Hb_000210_100 Hb_025466_010 Hb_025466_010 Hb_001310_040--Hb_025466_010 Hb_000649_040--Hb_000107_350 Hb_003935_070 Hb_003935_070 Hb_000649_040--Hb_003935_070 Hb_000808_150 Hb_000808_150 Hb_000649_040--Hb_000808_150 Hb_000077_310 Hb_000077_310 Hb_000649_040--Hb_000077_310 Hb_000749_020 Hb_000749_020 Hb_000649_040--Hb_000749_020 Hb_000805_010 Hb_000805_010 Hb_000649_040--Hb_000805_010 Hb_000107_350--Hb_000077_310 Hb_011310_040 Hb_011310_040 Hb_000107_350--Hb_011310_040 Hb_000107_350--Hb_000808_150 Hb_003226_250 Hb_003226_250 Hb_000107_350--Hb_003226_250 Hb_004055_020 Hb_004055_020 Hb_000107_350--Hb_004055_020 Hb_004918_010 Hb_004918_010 Hb_024758_030--Hb_004918_010 Hb_024758_030--Hb_000307_040 Hb_000347_100 Hb_000347_100 Hb_024758_030--Hb_000347_100 Hb_017043_040 Hb_017043_040 Hb_024758_030--Hb_017043_040 Hb_007885_020 Hb_007885_020 Hb_024758_030--Hb_007885_020 Hb_000639_010 Hb_000639_010 Hb_024758_030--Hb_000639_010 Hb_000120_940 Hb_000120_940 Hb_000920_160--Hb_000120_940 Hb_001922_030 Hb_001922_030 Hb_000920_160--Hb_001922_030 Hb_031089_020 Hb_031089_020 Hb_000920_160--Hb_031089_020 Hb_002759_070 Hb_002759_070 Hb_000920_160--Hb_002759_070 Hb_001329_180 Hb_001329_180 Hb_000920_160--Hb_001329_180 Hb_026527_010 Hb_026527_010 Hb_000920_160--Hb_026527_010 Hb_000907_160 Hb_000907_160 Hb_000307_040--Hb_000907_160 Hb_000563_470 Hb_000563_470 Hb_000307_040--Hb_000563_470 Hb_007632_070 Hb_007632_070 Hb_000307_040--Hb_007632_070 Hb_039222_010 Hb_039222_010 Hb_000307_040--Hb_039222_010 Hb_132840_150 Hb_132840_150 Hb_000307_040--Hb_132840_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.04208 1.86509 0.162681 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.809461 0 0.446311 0.297005 1.45121

CAGE analysis