Hb_000805_010

Information

Type -
Description -
Location Contig805: 1489-2364
Sequence    

Annotation

kegg
ID rcu:RCOM_0734530
description hypothetical protein
nr
ID XP_012066975.1
description PREDICTED: uncharacterized protein LOC105629931 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4W0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02953 PE=4 SV=1
Gene Ontology
ID GO:0044767
description PREDICTED: uncharacterized protein LOC105629931

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58950: 1522-2276
cDNA
(Sanger)
(ID:Location)		 001_E02.ab1: 1522-2276

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000805_010 0.0 - - PREDICTED: uncharacterized protein LOC105629931 [Jatropha curcas]
2 Hb_003935_070 0.0578995774 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
3 Hb_015141_010 0.1138339356 - - gamma-tocopherol methyltransferase [Hevea brasiliensis]
4 Hb_002759_220 0.1181680926 - - altered response to gravity (arg1), plant, putative [Ricinus communis]
5 Hb_002817_040 0.1199228839 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
6 Hb_002235_110 0.1199306637 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
7 Hb_000395_010 0.1201325529 - - alpha/beta hydrolase domain containing protein 1,3, putative [Ricinus communis]
8 Hb_000108_150 0.1208103135 - - alpha/beta hydrolase, putative [Ricinus communis]
9 Hb_003226_250 0.1215846267 - - PREDICTED: UDP-glucuronic acid decarboxylase 2 [Jatropha curcas]
10 Hb_000612_090 0.1223236627 - - PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Jatropha curcas]
11 Hb_000834_080 0.1243837128 - - PREDICTED: uncharacterized protein LOC105637718 [Jatropha curcas]
12 Hb_000649_040 0.1276280072 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]
13 Hb_000749_020 0.1285579772 - - Nucleotide-diphospho-sugar transferases superfamily protein isoform 1 [Theobroma cacao]
14 Hb_000441_050 0.1329128114 - - PREDICTED: 187-kDa microtubule-associated protein AIR9 [Jatropha curcas]
15 Hb_002305_010 0.1346857723 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
16 Hb_002542_060 0.1353503062 - - PREDICTED: wee1-like protein kinase [Jatropha curcas]
17 Hb_001124_230 0.1359066165 - - PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Jatropha curcas]
18 Hb_002028_180 0.136106114 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
19 Hb_001916_150 0.1365361039 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3 [Vitis vinifera]
20 Hb_004242_170 0.1369672608 - - calcium/calmodulin-regulated receptor-like kinase [Manihot esculenta]

Gene co-expression network

sample Hb_000805_010 Hb_000805_010 Hb_003935_070 Hb_003935_070 Hb_000805_010--Hb_003935_070 Hb_015141_010 Hb_015141_010 Hb_000805_010--Hb_015141_010 Hb_002759_220 Hb_002759_220 Hb_000805_010--Hb_002759_220 Hb_002817_040 Hb_002817_040 Hb_000805_010--Hb_002817_040 Hb_002235_110 Hb_002235_110 Hb_000805_010--Hb_002235_110 Hb_000395_010 Hb_000395_010 Hb_000805_010--Hb_000395_010 Hb_000649_040 Hb_000649_040 Hb_003935_070--Hb_000649_040 Hb_000108_150 Hb_000108_150 Hb_003935_070--Hb_000108_150 Hb_003935_070--Hb_015141_010 Hb_000749_020 Hb_000749_020 Hb_003935_070--Hb_000749_020 Hb_003935_070--Hb_002759_220 Hb_022137_050 Hb_022137_050 Hb_015141_010--Hb_022137_050 Hb_000352_280 Hb_000352_280 Hb_015141_010--Hb_000352_280 Hb_074197_030 Hb_074197_030 Hb_015141_010--Hb_074197_030 Hb_172426_060 Hb_172426_060 Hb_015141_010--Hb_172426_060 Hb_003226_200 Hb_003226_200 Hb_002759_220--Hb_003226_200 Hb_000193_340 Hb_000193_340 Hb_002759_220--Hb_000193_340 Hb_003226_250 Hb_003226_250 Hb_002759_220--Hb_003226_250 Hb_161396_010 Hb_161396_010 Hb_002759_220--Hb_161396_010 Hb_006153_160 Hb_006153_160 Hb_002759_220--Hb_006153_160 Hb_001369_100 Hb_001369_100 Hb_002817_040--Hb_001369_100 Hb_009079_050 Hb_009079_050 Hb_002817_040--Hb_009079_050 Hb_002817_040--Hb_000749_020 Hb_002817_040--Hb_000108_150 Hb_000612_090 Hb_000612_090 Hb_002817_040--Hb_000612_090 Hb_002028_180 Hb_002028_180 Hb_002817_040--Hb_002028_180 Hb_002235_110--Hb_000612_090 Hb_002949_020 Hb_002949_020 Hb_002235_110--Hb_002949_020 Hb_002235_110--Hb_074197_030 Hb_000054_030 Hb_000054_030 Hb_002235_110--Hb_000054_030 Hb_005276_070 Hb_005276_070 Hb_002235_110--Hb_005276_070 Hb_000210_080 Hb_000210_080 Hb_000395_010--Hb_000210_080 Hb_000684_200 Hb_000684_200 Hb_000395_010--Hb_000684_200 Hb_004837_100 Hb_004837_100 Hb_000395_010--Hb_004837_100 Hb_004162_270 Hb_004162_270 Hb_000395_010--Hb_004162_270 Hb_158092_100 Hb_158092_100 Hb_000395_010--Hb_158092_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.76701 6.76333 36.9393 49.9599 1.28002 3.93422
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.55654 6.49763 6.30786 9.53442 82.1984

CAGE analysis