Hb_000442_120

Information

Type -
Description -
Location Contig442: 120789-121864
Sequence    

Annotation

kegg
ID rcu:RCOM_0688350
description hypothetical protein
nr
ID XP_002520816.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9LYM3
description Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180 PE=2 SV=2
trembl
ID B9S497
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0688350 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000442_120 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000392_530 0.1762127647 - - hypothetical protein PHAVU_003G0695001g, partial [Phaseolus vulgaris]
3 Hb_002909_110 0.1931192995 - - PREDICTED: uncharacterized protein LOC105648153 [Jatropha curcas]
4 Hb_000094_200 0.1997523896 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001486_350 0.2216085836 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
6 Hb_001269_580 0.2216395044 - - PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
7 Hb_002110_290 0.2219578902 - - ring finger protein, putative [Ricinus communis]
8 Hb_002890_110 0.2272425129 - - PREDICTED: protein NRT1/ PTR FAMILY 4.3 [Jatropha curcas]
9 Hb_000392_540 0.2337334603 - - PREDICTED: hypersensitive-induced response protein 1 [Sesamum indicum]
10 Hb_000300_420 0.2345507161 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
11 Hb_000226_120 0.2350209777 - - PREDICTED: heparanase-like protein 3 isoform X1 [Jatropha curcas]
12 Hb_000455_070 0.2354593487 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]
13 Hb_006153_180 0.2368321879 - - PREDICTED: protein NRT1/ PTR FAMILY 6.3 isoform X1 [Jatropha curcas]
14 Hb_012707_010 0.2373260712 - - PREDICTED: uncharacterized protein C594.04c [Jatropha curcas]
15 Hb_010968_030 0.2402850423 - - PREDICTED: uncharacterized protein LOC105643149 [Jatropha curcas]
16 Hb_000705_270 0.241264226 - - PREDICTED: uncharacterized protein LOC105131117 [Populus euphratica]
17 Hb_003894_020 0.2457548927 - - plant sec1, putative [Ricinus communis]
18 Hb_009674_010 0.2472945481 - - AAEL007687-PA [Aedes aegypti]
19 Hb_000236_180 0.2483407638 - - serine hydroxymethyltransferase, putative [Ricinus communis]
20 Hb_005976_010 0.2494258683 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000442_120 Hb_000442_120 Hb_000392_530 Hb_000392_530 Hb_000442_120--Hb_000392_530 Hb_002909_110 Hb_002909_110 Hb_000442_120--Hb_002909_110 Hb_000094_200 Hb_000094_200 Hb_000442_120--Hb_000094_200 Hb_001486_350 Hb_001486_350 Hb_000442_120--Hb_001486_350 Hb_001269_580 Hb_001269_580 Hb_000442_120--Hb_001269_580 Hb_002110_290 Hb_002110_290 Hb_000442_120--Hb_002110_290 Hb_000705_270 Hb_000705_270 Hb_000392_530--Hb_000705_270 Hb_094437_030 Hb_094437_030 Hb_000392_530--Hb_094437_030 Hb_057556_010 Hb_057556_010 Hb_000392_530--Hb_057556_010 Hb_012077_010 Hb_012077_010 Hb_000392_530--Hb_012077_010 Hb_000392_540 Hb_000392_540 Hb_000392_530--Hb_000392_540 Hb_002909_110--Hb_002110_290 Hb_012707_010 Hb_012707_010 Hb_002909_110--Hb_012707_010 Hb_000300_420 Hb_000300_420 Hb_002909_110--Hb_000300_420 Hb_000950_030 Hb_000950_030 Hb_002909_110--Hb_000950_030 Hb_003397_020 Hb_003397_020 Hb_002909_110--Hb_003397_020 Hb_003894_020 Hb_003894_020 Hb_000094_200--Hb_003894_020 Hb_004055_020 Hb_004055_020 Hb_000094_200--Hb_004055_020 Hb_020805_140 Hb_020805_140 Hb_000094_200--Hb_020805_140 Hb_003304_110 Hb_003304_110 Hb_000094_200--Hb_003304_110 Hb_008695_220 Hb_008695_220 Hb_000094_200--Hb_008695_220 Hb_000806_130 Hb_000806_130 Hb_001486_350--Hb_000806_130 Hb_000696_070 Hb_000696_070 Hb_001486_350--Hb_000696_070 Hb_000236_190 Hb_000236_190 Hb_001486_350--Hb_000236_190 Hb_001486_350--Hb_012707_010 Hb_002781_050 Hb_002781_050 Hb_001486_350--Hb_002781_050 Hb_001486_350--Hb_000300_420 Hb_002890_110 Hb_002890_110 Hb_001269_580--Hb_002890_110 Hb_009122_010 Hb_009122_010 Hb_001269_580--Hb_009122_010 Hb_002750_040 Hb_002750_040 Hb_001269_580--Hb_002750_040 Hb_004117_020 Hb_004117_020 Hb_001269_580--Hb_004117_020 Hb_174541_030 Hb_174541_030 Hb_001269_580--Hb_174541_030 Hb_002203_020 Hb_002203_020 Hb_001269_580--Hb_002203_020 Hb_000455_070 Hb_000455_070 Hb_002110_290--Hb_000455_070 Hb_001186_110 Hb_001186_110 Hb_002110_290--Hb_001186_110 Hb_002110_290--Hb_000300_420 Hb_003185_070 Hb_003185_070 Hb_002110_290--Hb_003185_070 Hb_000054_010 Hb_000054_010 Hb_002110_290--Hb_000054_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0883402 0.0328625 0.95013 0 0.0384679
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.10023 0 0.137873 0.226064 0.457697

CAGE analysis