Hb_001123_240

Information

Type -
Description -
Location Contig1123: 200825-203059
Sequence    

Annotation

kegg
ID rcu:RCOM_1437820
description hypothetical protein
nr
ID AIY25011.1
description JAZ10 [Hevea brasiliensis]
swissprot
ID -
description -
trembl
ID A0A0B4RUX7
description JAZ10 OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001123_240 0.0 - - JAZ10 [Hevea brasiliensis]
2 Hb_002835_430 0.1682310961 - - Alliin lyase precursor, putative [Ricinus communis]
3 Hb_000788_060 0.2052569598 - - PREDICTED: uncharacterized protein LOC105629705 [Jatropha curcas]
4 Hb_075247_010 0.2180662486 - - PREDICTED: actin-depolymerizing factor 2-like [Nelumbo nucifera]
5 Hb_004162_060 0.2323123616 - - unnamed protein product [Vitis vinifera]
6 Hb_004453_070 0.2413591297 transcription factor TF Family: CPP PREDICTED: CRC domain-containing protein TSO1-like isoform X1 [Jatropha curcas]
7 Hb_023344_070 0.2418029323 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_001486_010 0.2439099259 - - adenylsulfate kinase, putative [Ricinus communis]
9 Hb_000465_270 0.2472684906 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001242_050 0.2495716489 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004204_110 0.2560204656 - - PREDICTED: UDP-glucose 6-dehydrogenase 1-like [Jatropha curcas]
12 Hb_002027_030 0.2571041734 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000382_020 0.2582042676 - - PREDICTED: uncharacterized protein LOC105633610 [Jatropha curcas]
14 Hb_002249_070 0.2607620292 - - gcn4-complementing protein, putative [Ricinus communis]
15 Hb_126757_010 0.261506884 - - protein phosphatase 2c, putative [Ricinus communis]
16 Hb_168319_010 0.261932183 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
17 Hb_002998_070 0.2645076646 - - hypothetical protein CARUB_v10019139mg, partial [Capsella rubella]
18 Hb_007975_050 0.2679430607 - - PREDICTED: uncharacterized protein LOC105649339 [Jatropha curcas]
19 Hb_173030_010 0.2718979521 - - hypothetical protein RCOM_1321060 [Ricinus communis]
20 Hb_002450_030 0.2722292069 - - ATPP2-A13, putative [Ricinus communis]

Gene co-expression network

sample Hb_001123_240 Hb_001123_240 Hb_002835_430 Hb_002835_430 Hb_001123_240--Hb_002835_430 Hb_000788_060 Hb_000788_060 Hb_001123_240--Hb_000788_060 Hb_075247_010 Hb_075247_010 Hb_001123_240--Hb_075247_010 Hb_004162_060 Hb_004162_060 Hb_001123_240--Hb_004162_060 Hb_004453_070 Hb_004453_070 Hb_001123_240--Hb_004453_070 Hb_023344_070 Hb_023344_070 Hb_001123_240--Hb_023344_070 Hb_002835_430--Hb_000788_060 Hb_005306_010 Hb_005306_010 Hb_002835_430--Hb_005306_010 Hb_000042_220 Hb_000042_220 Hb_002835_430--Hb_000042_220 Hb_006907_080 Hb_006907_080 Hb_002835_430--Hb_006907_080 Hb_001242_050 Hb_001242_050 Hb_002835_430--Hb_001242_050 Hb_000788_060--Hb_001242_050 Hb_000788_060--Hb_075247_010 Hb_000465_270 Hb_000465_270 Hb_000788_060--Hb_000465_270 Hb_023344_080 Hb_023344_080 Hb_000788_060--Hb_023344_080 Hb_002863_030 Hb_002863_030 Hb_000788_060--Hb_002863_030 Hb_001486_010 Hb_001486_010 Hb_000788_060--Hb_001486_010 Hb_004800_100 Hb_004800_100 Hb_075247_010--Hb_004800_100 Hb_075247_010--Hb_000465_270 Hb_004627_030 Hb_004627_030 Hb_075247_010--Hb_004627_030 Hb_012305_130 Hb_012305_130 Hb_075247_010--Hb_012305_130 Hb_000252_100 Hb_000252_100 Hb_075247_010--Hb_000252_100 Hb_069355_010 Hb_069355_010 Hb_004162_060--Hb_069355_010 Hb_001481_130 Hb_001481_130 Hb_004162_060--Hb_001481_130 Hb_001898_140 Hb_001898_140 Hb_004162_060--Hb_001898_140 Hb_003878_050 Hb_003878_050 Hb_004162_060--Hb_003878_050 Hb_126757_010 Hb_126757_010 Hb_004162_060--Hb_126757_010 Hb_000210_100 Hb_000210_100 Hb_004162_060--Hb_000210_100 Hb_001195_410 Hb_001195_410 Hb_004453_070--Hb_001195_410 Hb_000796_020 Hb_000796_020 Hb_004453_070--Hb_000796_020 Hb_006569_060 Hb_006569_060 Hb_004453_070--Hb_006569_060 Hb_000776_060 Hb_000776_060 Hb_004453_070--Hb_000776_060 Hb_012362_030 Hb_012362_030 Hb_004453_070--Hb_012362_030 Hb_000062_090 Hb_000062_090 Hb_004453_070--Hb_000062_090 Hb_026198_030 Hb_026198_030 Hb_023344_070--Hb_026198_030 Hb_000384_110 Hb_000384_110 Hb_023344_070--Hb_000384_110 Hb_002876_160 Hb_002876_160 Hb_023344_070--Hb_002876_160 Hb_018118_030 Hb_018118_030 Hb_023344_070--Hb_018118_030 Hb_000398_050 Hb_000398_050 Hb_023344_070--Hb_000398_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.148787 5.68358 5.01699 16.9054 0.895737 0.221698
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.97019 3.26964 13.468 2.47274 0.692292

CAGE analysis