Hb_018118_030

Information

Type -
Description -
Location Contig18118: 36898-37206
Sequence    

Annotation

kegg
ID mus:103975188
description putative multidrug resistance protein
nr
ID XP_009388372.1
description PREDICTED: putative multidrug resistance protein, partial [Musa acuminata subsp. malaccensis]
swissprot
ID -
description -
trembl
ID M0UD26
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
Gene Ontology
ID GO:0016021
description multidrug resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018118_030 0.0 - - PREDICTED: putative multidrug resistance protein, partial [Musa acuminata subsp. malaccensis]
2 Hb_000384_110 0.1633319448 - - conserved hypothetical protein [Ricinus communis]
3 Hb_144096_010 0.1730256623 - - aldo-keto reductase, putative [Ricinus communis]
4 Hb_000931_020 0.1782279188 - - PREDICTED: uncharacterized protein LOC105649774 isoform X1 [Jatropha curcas]
5 Hb_005188_030 0.1871590428 - - amino acid transporter, putative [Ricinus communis]
6 Hb_063716_090 0.1877154142 - - conserved hypothetical protein [Ricinus communis]
7 Hb_135757_010 0.1906136027 - - PREDICTED: subtilisin-like protease SBT1.6 [Jatropha curcas]
8 Hb_000622_340 0.1947600863 - - PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [Jatropha curcas]
9 Hb_001124_110 0.1978905624 - - PREDICTED: sodium/hydrogen exchanger 2-like isoform X2 [Jatropha curcas]
10 Hb_083628_010 0.1986300677 - - PREDICTED: probable serine protease EDA2 [Jatropha curcas]
11 Hb_118507_010 0.2022643183 - - hypothetical protein VITISV_019292 [Vitis vinifera]
12 Hb_000739_080 0.2024494706 - - PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Jatropha curcas]
13 Hb_004586_330 0.2036688206 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000457_140 0.2054033285 - - PREDICTED: transmembrane protein 136-like [Jatropha curcas]
15 Hb_002192_030 0.2073822336 - - conserved hypothetical protein [Ricinus communis]
16 Hb_131035_010 0.2081058978 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000984_310 0.2090703387 - - Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]
18 Hb_000181_290 0.2098848967 - - hypothetical protein POPTR_0001s41000g [Populus trichocarpa]
19 Hb_005539_310 0.2115773211 - - basic helix-loop-helix-containing protein, putative [Ricinus communis]
20 Hb_003910_010 0.2125390441 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]

Gene co-expression network

sample Hb_018118_030 Hb_018118_030 Hb_000384_110 Hb_000384_110 Hb_018118_030--Hb_000384_110 Hb_144096_010 Hb_144096_010 Hb_018118_030--Hb_144096_010 Hb_000931_020 Hb_000931_020 Hb_018118_030--Hb_000931_020 Hb_005188_030 Hb_005188_030 Hb_018118_030--Hb_005188_030 Hb_063716_090 Hb_063716_090 Hb_018118_030--Hb_063716_090 Hb_135757_010 Hb_135757_010 Hb_018118_030--Hb_135757_010 Hb_003938_160 Hb_003938_160 Hb_000384_110--Hb_003938_160 Hb_000384_110--Hb_005188_030 Hb_000384_110--Hb_000931_020 Hb_000984_310 Hb_000984_310 Hb_000384_110--Hb_000984_310 Hb_000622_340 Hb_000622_340 Hb_000384_110--Hb_000622_340 Hb_039342_010 Hb_039342_010 Hb_144096_010--Hb_039342_010 Hb_144096_010--Hb_005188_030 Hb_030736_070 Hb_030736_070 Hb_144096_010--Hb_030736_070 Hb_000051_050 Hb_000051_050 Hb_144096_010--Hb_000051_050 Hb_000739_080 Hb_000739_080 Hb_144096_010--Hb_000739_080 Hb_000931_020--Hb_000622_340 Hb_003078_020 Hb_003078_020 Hb_000931_020--Hb_003078_020 Hb_001357_040 Hb_001357_040 Hb_000931_020--Hb_001357_040 Hb_008937_010 Hb_008937_010 Hb_000931_020--Hb_008937_010 Hb_000991_040 Hb_000991_040 Hb_000931_020--Hb_000991_040 Hb_000260_600 Hb_000260_600 Hb_000931_020--Hb_000260_600 Hb_007409_040 Hb_007409_040 Hb_005188_030--Hb_007409_040 Hb_005188_030--Hb_003078_020 Hb_005188_030--Hb_000931_020 Hb_000802_090 Hb_000802_090 Hb_005188_030--Hb_000802_090 Hb_000815_240 Hb_000815_240 Hb_005188_030--Hb_000815_240 Hb_006441_020 Hb_006441_020 Hb_005188_030--Hb_006441_020 Hb_017948_030 Hb_017948_030 Hb_063716_090--Hb_017948_030 Hb_003599_030 Hb_003599_030 Hb_063716_090--Hb_003599_030 Hb_001675_320 Hb_001675_320 Hb_063716_090--Hb_001675_320 Hb_005539_310 Hb_005539_310 Hb_063716_090--Hb_005539_310 Hb_000203_270 Hb_000203_270 Hb_063716_090--Hb_000203_270 Hb_004987_020 Hb_004987_020 Hb_063716_090--Hb_004987_020 Hb_000679_100 Hb_000679_100 Hb_135757_010--Hb_000679_100 Hb_001051_070 Hb_001051_070 Hb_135757_010--Hb_001051_070 Hb_029695_050 Hb_029695_050 Hb_135757_010--Hb_029695_050 Hb_011930_150 Hb_011930_150 Hb_135757_010--Hb_011930_150 Hb_001159_030 Hb_001159_030 Hb_135757_010--Hb_001159_030 Hb_030736_060 Hb_030736_060 Hb_135757_010--Hb_030736_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.8016 6.20795 2.47503 14.1213 6.03437 1.42216
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.7391 1.36901 3.55765 4.67816 0.4299

CAGE analysis