Hb_023344_080

Information

Type -
Description -
Location Contig23344: 93101-97680
Sequence    

Annotation

kegg
ID rcu:RCOM_0542040
description hypothetical protein
nr
ID XP_012085219.1
description PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
swissprot
ID F4KFT7
description Probable aminopyrimidine aminohydrolase, mitochondrial OS=Arabidopsis thaliana GN=TNEA_C PE=2 SV=1
trembl
ID A0A067K3R9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17617 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24524: 93059-97267 , PASA_asmbl_24525: 93188-97402
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023344_080 0.0 - - PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
2 Hb_000788_060 0.1439189288 - - PREDICTED: uncharacterized protein LOC105629705 [Jatropha curcas]
3 Hb_001856_200 0.1470942699 - - Esterase PIR7B, putative [Ricinus communis]
4 Hb_006909_060 0.1475893852 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum]
5 Hb_000987_060 0.1548569675 - - PREDICTED: BRCA1-A complex subunit Abraxas [Jatropha curcas]
6 Hb_001619_040 0.17018391 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
7 Hb_000239_020 0.1723771669 - - PREDICTED: F-box/kelch-repeat protein At5g43190 [Jatropha curcas]
8 Hb_000732_250 0.1733224175 - - PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial-like [Populus euphratica]
9 Hb_002701_220 0.1757307429 - - PREDICTED: solute carrier family 25 member 44 [Jatropha curcas]
10 Hb_000210_010 0.1764953272 - - PREDICTED: probable CCR4-associated factor 1 homolog 11 [Jatropha curcas]
11 Hb_168319_010 0.1773894373 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
12 Hb_005663_070 0.1774770757 - - dehydrin protein [Manihot esculenta]
13 Hb_005074_030 0.1784823768 - - -
14 Hb_000538_030 0.1803002358 - - glutathione s-transferase, putative [Ricinus communis]
15 Hb_000432_090 0.180367691 - - calcium-dependent protein kinase [Hevea brasiliensis]
16 Hb_141990_040 0.1809512491 - - Protein SCAR2, putative [Ricinus communis]
17 Hb_000057_140 0.1815346129 - - Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]
18 Hb_008643_200 0.1835255926 transcription factor TF Family: BES1 PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]
19 Hb_000649_130 0.1856017544 - - Polcalcin Jun o, putative [Ricinus communis]
20 Hb_010050_050 0.1857868091 - - PREDICTED: piezo-type mechanosensitive ion channel homolog isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_023344_080 Hb_023344_080 Hb_000788_060 Hb_000788_060 Hb_023344_080--Hb_000788_060 Hb_001856_200 Hb_001856_200 Hb_023344_080--Hb_001856_200 Hb_006909_060 Hb_006909_060 Hb_023344_080--Hb_006909_060 Hb_000987_060 Hb_000987_060 Hb_023344_080--Hb_000987_060 Hb_001619_040 Hb_001619_040 Hb_023344_080--Hb_001619_040 Hb_000239_020 Hb_000239_020 Hb_023344_080--Hb_000239_020 Hb_001242_050 Hb_001242_050 Hb_000788_060--Hb_001242_050 Hb_075247_010 Hb_075247_010 Hb_000788_060--Hb_075247_010 Hb_000465_270 Hb_000465_270 Hb_000788_060--Hb_000465_270 Hb_002863_030 Hb_002863_030 Hb_000788_060--Hb_002863_030 Hb_001486_010 Hb_001486_010 Hb_000788_060--Hb_001486_010 Hb_002217_020 Hb_002217_020 Hb_001856_200--Hb_002217_020 Hb_001825_060 Hb_001825_060 Hb_001856_200--Hb_001825_060 Hb_001856_200--Hb_000987_060 Hb_000210_010 Hb_000210_010 Hb_001856_200--Hb_000210_010 Hb_141990_040 Hb_141990_040 Hb_001856_200--Hb_141990_040 Hb_000009_450 Hb_000009_450 Hb_001856_200--Hb_000009_450 Hb_006909_060--Hb_000210_010 Hb_006909_060--Hb_000987_060 Hb_000056_170 Hb_000056_170 Hb_006909_060--Hb_000056_170 Hb_171900_020 Hb_171900_020 Hb_006909_060--Hb_171900_020 Hb_002701_220 Hb_002701_220 Hb_006909_060--Hb_002701_220 Hb_001944_020 Hb_001944_020 Hb_006909_060--Hb_001944_020 Hb_000732_250 Hb_000732_250 Hb_000987_060--Hb_000732_250 Hb_006788_140 Hb_006788_140 Hb_000987_060--Hb_006788_140 Hb_007943_050 Hb_007943_050 Hb_000987_060--Hb_007943_050 Hb_002097_200 Hb_002097_200 Hb_000987_060--Hb_002097_200 Hb_000152_330 Hb_000152_330 Hb_001619_040--Hb_000152_330 Hb_000226_080 Hb_000226_080 Hb_001619_040--Hb_000226_080 Hb_024468_010 Hb_024468_010 Hb_001619_040--Hb_024468_010 Hb_001117_130 Hb_001117_130 Hb_001619_040--Hb_001117_130 Hb_005356_040 Hb_005356_040 Hb_001619_040--Hb_005356_040 Hb_000649_150 Hb_000649_150 Hb_001619_040--Hb_000649_150 Hb_027393_030 Hb_027393_030 Hb_000239_020--Hb_027393_030 Hb_000367_260 Hb_000367_260 Hb_000239_020--Hb_000367_260 Hb_000549_040 Hb_000549_040 Hb_000239_020--Hb_000549_040 Hb_001504_330 Hb_001504_330 Hb_000239_020--Hb_001504_330 Hb_004993_060 Hb_004993_060 Hb_000239_020--Hb_004993_060 Hb_005542_060 Hb_005542_060 Hb_000239_020--Hb_005542_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.81442 29.5764 11.4961 18.6563 1.29512 3.97421
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.9416 21.0277 29.6181 9.8999 3.23038

CAGE analysis