Hb_000649_150

Information

Type -
Description -
Location Contig649: 153132-153362
Sequence    

Annotation

kegg
ID rcu:RCOM_0597970
description hypothetical protein
nr
ID XP_012072297.1
description PREDICTED: uncharacterized protein LOC105634115 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0U5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04753 PE=4 SV=1
Gene Ontology
ID GO:0005634
description PREDICTED: uncharacterized protein LOC105634115

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52490: 153517-153735
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000649_150 0.0 - - PREDICTED: uncharacterized protein LOC105634115 [Jatropha curcas]
2 Hb_001619_040 0.1509583738 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
3 Hb_001117_130 0.1625668583 - - PREDICTED: uncharacterized protein LOC105629705 [Jatropha curcas]
4 Hb_001944_020 0.1926390092 - - PREDICTED: uncharacterized protein LOC105636535 [Jatropha curcas]
5 Hb_001794_060 0.2047200404 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001411_140 0.2111029816 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2 [Jatropha curcas]
7 Hb_000753_230 0.2118450765 - - PREDICTED: probable galacturonosyltransferase 11 isoform X1 [Jatropha curcas]
8 Hb_000021_050 0.2119009452 - - PREDICTED: uncharacterized protein LOC105645238 [Jatropha curcas]
9 Hb_003327_070 0.2148789605 - - PREDICTED: UDP-glycosyltransferase 73B4-like [Jatropha curcas]
10 Hb_091889_020 0.2159335414 - - -
11 Hb_168319_010 0.217531894 - - PREDICTED: ACT domain-containing protein ACR4 isoform X2 [Jatropha curcas]
12 Hb_002217_090 0.2183366188 - - PREDICTED: probable protein phosphatase 2C 13 [Jatropha curcas]
13 Hb_000656_390 0.2189243665 - - PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Jatropha curcas]
14 Hb_000152_320 0.2202302231 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003747_210 0.2221127113 - - PREDICTED: uncharacterized protein LOC105630240 [Jatropha curcas]
16 Hb_000152_330 0.2233733307 - - PREDICTED: AT-hook motif nuclear-localized protein 6-like [Jatropha curcas]
17 Hb_005356_040 0.2246286615 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
18 Hb_001189_040 0.2248719861 - - hypothetical protein POPTR_0014s10420g [Populus trichocarpa]
19 Hb_000912_100 0.2248860544 - - PREDICTED: CMP-sialic acid transporter 3-like isoform X2 [Elaeis guineensis]
20 Hb_001507_030 0.2253242021 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000649_150 Hb_000649_150 Hb_001619_040 Hb_001619_040 Hb_000649_150--Hb_001619_040 Hb_001117_130 Hb_001117_130 Hb_000649_150--Hb_001117_130 Hb_001944_020 Hb_001944_020 Hb_000649_150--Hb_001944_020 Hb_001794_060 Hb_001794_060 Hb_000649_150--Hb_001794_060 Hb_001411_140 Hb_001411_140 Hb_000649_150--Hb_001411_140 Hb_000753_230 Hb_000753_230 Hb_000649_150--Hb_000753_230 Hb_000152_330 Hb_000152_330 Hb_001619_040--Hb_000152_330 Hb_000226_080 Hb_000226_080 Hb_001619_040--Hb_000226_080 Hb_024468_010 Hb_024468_010 Hb_001619_040--Hb_024468_010 Hb_001619_040--Hb_001117_130 Hb_005356_040 Hb_005356_040 Hb_001619_040--Hb_005356_040 Hb_001159_190 Hb_001159_190 Hb_001117_130--Hb_001159_190 Hb_001117_130--Hb_000753_230 Hb_000656_390 Hb_000656_390 Hb_001117_130--Hb_000656_390 Hb_000656_310 Hb_000656_310 Hb_001117_130--Hb_000656_310 Hb_066920_030 Hb_066920_030 Hb_001117_130--Hb_066920_030 Hb_002701_220 Hb_002701_220 Hb_001944_020--Hb_002701_220 Hb_002217_090 Hb_002217_090 Hb_001944_020--Hb_002217_090 Hb_012107_010 Hb_012107_010 Hb_001944_020--Hb_012107_010 Hb_002053_130 Hb_002053_130 Hb_001944_020--Hb_002053_130 Hb_003747_210 Hb_003747_210 Hb_001944_020--Hb_003747_210 Hb_001500_030 Hb_001500_030 Hb_001944_020--Hb_001500_030 Hb_002572_050 Hb_002572_050 Hb_001794_060--Hb_002572_050 Hb_126380_010 Hb_126380_010 Hb_001794_060--Hb_126380_010 Hb_001369_570 Hb_001369_570 Hb_001794_060--Hb_001369_570 Hb_008511_100 Hb_008511_100 Hb_001794_060--Hb_008511_100 Hb_001794_060--Hb_001944_020 Hb_001433_140 Hb_001433_140 Hb_001794_060--Hb_001433_140 Hb_002307_270 Hb_002307_270 Hb_001411_140--Hb_002307_270 Hb_001405_160 Hb_001405_160 Hb_001411_140--Hb_001405_160 Hb_000836_380 Hb_000836_380 Hb_001411_140--Hb_000836_380 Hb_001411_140--Hb_000152_330 Hb_000951_130 Hb_000951_130 Hb_001411_140--Hb_000951_130 Hb_001411_140--Hb_000753_230 Hb_000173_470 Hb_000173_470 Hb_000753_230--Hb_000173_470 Hb_003688_180 Hb_003688_180 Hb_000753_230--Hb_003688_180 Hb_000753_230--Hb_066920_030 Hb_038574_010 Hb_038574_010 Hb_000753_230--Hb_038574_010 Hb_017387_010 Hb_017387_010 Hb_000753_230--Hb_017387_010 Hb_020178_040 Hb_020178_040 Hb_000753_230--Hb_020178_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.624393 30.7457 3.55588 29.9498 3.81708 2.50946
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.9022 16.948 20.3627 10.4281 9.963

CAGE analysis