Hb_000230_170

Information

Type -
Description -
Location Contig230: 213857-215635
Sequence    

Annotation

kegg
ID rcu:RCOM_0679080
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_012069450.1
description PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
swissprot
ID Q9ZNV9
description Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1
trembl
ID A0A067KYI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02051 PE=4 SV=1
Gene Ontology
ID GO:0004871
description histidine-containing phosphotransfer protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24005: 213741-215688 , PASA_asmbl_24006: 213741-215621
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000230_170 0.0 - - PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
2 Hb_001054_060 0.1640415401 - - PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Jatropha curcas]
3 Hb_182424_020 0.1645566321 - - hypothetical protein POPTR_0006s24190g [Populus trichocarpa]
4 Hb_000054_030 0.1672382528 - - hypothetical protein POPTR_0010s17680g [Populus trichocarpa]
5 Hb_178968_080 0.1698828892 - - PREDICTED: serine/threonine-protein kinase OSR1 isoform X2 [Jatropha curcas]
6 Hb_012132_020 0.1702091321 - - glutamine synthetase [Hevea brasiliensis]
7 Hb_006775_110 0.171896912 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
8 Hb_000077_400 0.1749178833 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_082550_010 0.1783406925 - - hypothetical protein CISIN_1g0081081mg, partial [Citrus sinensis]
10 Hb_007134_030 0.1827837718 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
11 Hb_124579_020 0.1871767349 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
12 Hb_002949_020 0.1873926872 transcription factor TF Family: bHLH hypothetical protein POPTR_0002s23650g [Populus trichocarpa]
13 Hb_000032_600 0.18933429 - - PREDICTED: B2 protein [Jatropha curcas]
14 Hb_000130_480 0.1895915356 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
15 Hb_000023_050 0.1913555899 - - PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
16 Hb_004032_110 0.1932393287 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
17 Hb_000318_400 0.1982358393 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000457_250 0.1984932537 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
19 Hb_005493_010 0.1992692488 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
20 Hb_001621_100 0.2004734031 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4 [Jatropha curcas]

Gene co-expression network

sample Hb_000230_170 Hb_000230_170 Hb_001054_060 Hb_001054_060 Hb_000230_170--Hb_001054_060 Hb_182424_020 Hb_182424_020 Hb_000230_170--Hb_182424_020 Hb_000054_030 Hb_000054_030 Hb_000230_170--Hb_000054_030 Hb_178968_080 Hb_178968_080 Hb_000230_170--Hb_178968_080 Hb_012132_020 Hb_012132_020 Hb_000230_170--Hb_012132_020 Hb_006775_110 Hb_006775_110 Hb_000230_170--Hb_006775_110 Hb_000032_600 Hb_000032_600 Hb_001054_060--Hb_000032_600 Hb_187959_010 Hb_187959_010 Hb_001054_060--Hb_187959_010 Hb_067664_010 Hb_067664_010 Hb_001054_060--Hb_067664_010 Hb_000977_150 Hb_000977_150 Hb_001054_060--Hb_000977_150 Hb_030312_030 Hb_030312_030 Hb_001054_060--Hb_030312_030 Hb_000997_320 Hb_000997_320 Hb_001054_060--Hb_000997_320 Hb_000975_170 Hb_000975_170 Hb_182424_020--Hb_000975_170 Hb_181463_020 Hb_181463_020 Hb_182424_020--Hb_181463_020 Hb_046117_030 Hb_046117_030 Hb_182424_020--Hb_046117_030 Hb_031330_020 Hb_031330_020 Hb_182424_020--Hb_031330_020 Hb_082550_010 Hb_082550_010 Hb_182424_020--Hb_082550_010 Hb_002235_110 Hb_002235_110 Hb_000054_030--Hb_002235_110 Hb_002949_020 Hb_002949_020 Hb_000054_030--Hb_002949_020 Hb_002397_050 Hb_002397_050 Hb_000054_030--Hb_002397_050 Hb_003226_200 Hb_003226_200 Hb_000054_030--Hb_003226_200 Hb_033152_110 Hb_033152_110 Hb_000054_030--Hb_033152_110 Hb_074197_030 Hb_074197_030 Hb_000054_030--Hb_074197_030 Hb_000130_200 Hb_000130_200 Hb_178968_080--Hb_000130_200 Hb_178968_080--Hb_000032_600 Hb_000070_110 Hb_000070_110 Hb_178968_080--Hb_000070_110 Hb_001040_150 Hb_001040_150 Hb_178968_080--Hb_001040_150 Hb_000622_060 Hb_000622_060 Hb_178968_080--Hb_000622_060 Hb_178968_080--Hb_001054_060 Hb_005183_040 Hb_005183_040 Hb_012132_020--Hb_005183_040 Hb_000210_040 Hb_000210_040 Hb_012132_020--Hb_000210_040 Hb_164945_020 Hb_164945_020 Hb_012132_020--Hb_164945_020 Hb_005493_010 Hb_005493_010 Hb_012132_020--Hb_005493_010 Hb_002716_110 Hb_002716_110 Hb_012132_020--Hb_002716_110 Hb_002817_050 Hb_002817_050 Hb_012132_020--Hb_002817_050 Hb_001488_350 Hb_001488_350 Hb_006775_110--Hb_001488_350 Hb_024570_030 Hb_024570_030 Hb_006775_110--Hb_024570_030 Hb_039435_010 Hb_039435_010 Hb_006775_110--Hb_039435_010 Hb_001916_030 Hb_001916_030 Hb_006775_110--Hb_001916_030 Hb_004374_160 Hb_004374_160 Hb_006775_110--Hb_004374_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.16838 7.78322 18.3355 29.2542 0.0744996 0.28831
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.97034 10.8384 0.255637 29.7836 63.6873

CAGE analysis