Hb_006775_110

Information

Type -
Description -
Location Contig6775: 87062-87451
Sequence    

Annotation

kegg
ID cic:CICLE_v10017454mg
description hypothetical protein
nr
ID XP_012091865.1
description PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JEH9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21644 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006775_110 0.0 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
2 Hb_001488_350 0.1496329553 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000230_170 0.171896912 - - PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
4 Hb_024570_030 0.1820618752 - - cytochrome P450, putative [Ricinus communis]
5 Hb_039435_010 0.1854613937 - - hypothetical protein SORBIDRAFT_10g025530 [Sorghum bicolor]
6 Hb_001916_030 0.1868474351 - - PREDICTED: uncharacterized protein LOC105802975 [Gossypium raimondii]
7 Hb_004374_160 0.1887548275 transcription factor TF Family: bHLH hypothetical protein JCGZ_20587 [Jatropha curcas]
8 Hb_002949_020 0.1919718994 transcription factor TF Family: bHLH hypothetical protein POPTR_0002s23650g [Populus trichocarpa]
9 Hb_002636_060 0.1935171591 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006142_050 0.1974754339 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
11 Hb_130250_010 0.1978401162 - - Putative disease resistance RGA4 [Gossypium arboreum]
12 Hb_000163_110 0.2016585425 - - PREDICTED: blue-light photoreceptor PHR2 [Jatropha curcas]
13 Hb_074197_030 0.2018731019 - - unnamed protein product [Vitis vinifera]
14 Hb_000237_120 0.204627138 - - PREDICTED: beta-galactosidase 3-like [Jatropha curcas]
15 Hb_000457_250 0.207660009 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
16 Hb_004032_110 0.2080083153 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
17 Hb_001278_090 0.2081983089 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
18 Hb_000318_400 0.2091723049 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000054_030 0.2104380848 - - hypothetical protein POPTR_0010s17680g [Populus trichocarpa]
20 Hb_068804_030 0.2107853946 - - PREDICTED: uncharacterized protein LOC105639932 [Jatropha curcas]

Gene co-expression network

sample Hb_006775_110 Hb_006775_110 Hb_001488_350 Hb_001488_350 Hb_006775_110--Hb_001488_350 Hb_000230_170 Hb_000230_170 Hb_006775_110--Hb_000230_170 Hb_024570_030 Hb_024570_030 Hb_006775_110--Hb_024570_030 Hb_039435_010 Hb_039435_010 Hb_006775_110--Hb_039435_010 Hb_001916_030 Hb_001916_030 Hb_006775_110--Hb_001916_030 Hb_004374_160 Hb_004374_160 Hb_006775_110--Hb_004374_160 Hb_000181_220 Hb_000181_220 Hb_001488_350--Hb_000181_220 Hb_001488_350--Hb_004374_160 Hb_001488_350--Hb_039435_010 Hb_000416_090 Hb_000416_090 Hb_001488_350--Hb_000416_090 Hb_000621_030 Hb_000621_030 Hb_001488_350--Hb_000621_030 Hb_001278_090 Hb_001278_090 Hb_001488_350--Hb_001278_090 Hb_001054_060 Hb_001054_060 Hb_000230_170--Hb_001054_060 Hb_182424_020 Hb_182424_020 Hb_000230_170--Hb_182424_020 Hb_000054_030 Hb_000054_030 Hb_000230_170--Hb_000054_030 Hb_178968_080 Hb_178968_080 Hb_000230_170--Hb_178968_080 Hb_012132_020 Hb_012132_020 Hb_000230_170--Hb_012132_020 Hb_024570_030--Hb_039435_010 Hb_006053_020 Hb_006053_020 Hb_024570_030--Hb_006053_020 Hb_002701_060 Hb_002701_060 Hb_024570_030--Hb_002701_060 Hb_000072_110 Hb_000072_110 Hb_024570_030--Hb_000072_110 Hb_002701_170 Hb_002701_170 Hb_024570_030--Hb_002701_170 Hb_000164_110 Hb_000164_110 Hb_024570_030--Hb_000164_110 Hb_039435_010--Hb_004374_160 Hb_004116_050 Hb_004116_050 Hb_039435_010--Hb_004116_050 Hb_119443_010 Hb_119443_010 Hb_039435_010--Hb_119443_010 Hb_001244_070 Hb_001244_070 Hb_039435_010--Hb_001244_070 Hb_004346_010 Hb_004346_010 Hb_001916_030--Hb_004346_010 Hb_001675_040 Hb_001675_040 Hb_001916_030--Hb_001675_040 Hb_007134_030 Hb_007134_030 Hb_001916_030--Hb_007134_030 Hb_000645_250 Hb_000645_250 Hb_001916_030--Hb_000645_250 Hb_060152_010 Hb_060152_010 Hb_001916_030--Hb_060152_010 Hb_000373_060 Hb_000373_060 Hb_001916_030--Hb_000373_060 Hb_004374_160--Hb_000621_030 Hb_004881_070 Hb_004881_070 Hb_004374_160--Hb_004881_070 Hb_002817_050 Hb_002817_050 Hb_004374_160--Hb_002817_050 Hb_005493_010 Hb_005493_010 Hb_004374_160--Hb_005493_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0881857 0.188407 4.95015 5.28397 0.0832147 0.563694
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.41862 1.1509 0 6.09001 10.0255

CAGE analysis