Hb_000165_100

Information

Type -
Description -
Location Contig165: 102357-105998
Sequence    

Annotation

kegg
ID rcu:RCOM_0687210
description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, putative (EC:3.5.1.52)
nr
ID XP_012086876.1
description PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
swissprot
ID P81898
description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis PE=1 SV=2
trembl
ID A0A067L8G8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01216 PE=4 SV=1
Gene Ontology
ID GO:0000224
description peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine amidase a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15194: 104611-104818 , PASA_asmbl_15195: 105814-107332
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000165_100 0.0 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
2 Hb_000035_060 0.1428945409 - - PREDICTED: chaperone protein ClpB4, mitochondrial [Jatropha curcas]
3 Hb_002888_040 0.1478752287 - - hypothetical protein B456_009G267200 [Gossypium raimondii]
4 Hb_001969_130 0.1495619669 - - PREDICTED: molybdate transporter 2 [Jatropha curcas]
5 Hb_000321_120 0.1514810178 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
6 Hb_026698_020 0.1523144582 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
7 Hb_000959_010 0.1551072221 - - PREDICTED: violaxanthin de-epoxidase, chloroplastic [Jatropha curcas]
8 Hb_004605_020 0.1583775733 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Jatropha curcas]
9 Hb_029584_160 0.1589757392 - - PREDICTED: thioredoxin-like 2, chloroplastic [Populus euphratica]
10 Hb_003517_090 0.1595796706 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
11 Hb_000365_220 0.1599813273 - - protein phosphatase-1, putative [Ricinus communis]
12 Hb_006040_170 0.1602190421 - - NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
13 Hb_000103_410 0.1610410169 - - PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Jatropha curcas]
14 Hb_001195_250 0.1615379209 - - lrr receptor protein kinase, putative [Ricinus communis]
15 Hb_003177_090 0.1622504 - - PREDICTED: filament-like plant protein 4 [Jatropha curcas]
16 Hb_001689_030 0.1629029014 - - PREDICTED: J domain-containing protein required for chloroplast accumulation response 1 [Jatropha curcas]
17 Hb_003007_030 0.1629433229 - - -
18 Hb_025045_010 0.1650984447 - - catalytic, putative [Ricinus communis]
19 Hb_000665_200 0.1660244087 - - calcineurin-like phosphoesterase [Manihot esculenta]
20 Hb_001141_060 0.1665081023 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000165_100 Hb_000165_100 Hb_000035_060 Hb_000035_060 Hb_000165_100--Hb_000035_060 Hb_002888_040 Hb_002888_040 Hb_000165_100--Hb_002888_040 Hb_001969_130 Hb_001969_130 Hb_000165_100--Hb_001969_130 Hb_000321_120 Hb_000321_120 Hb_000165_100--Hb_000321_120 Hb_026698_020 Hb_026698_020 Hb_000165_100--Hb_026698_020 Hb_000959_010 Hb_000959_010 Hb_000165_100--Hb_000959_010 Hb_000556_070 Hb_000556_070 Hb_000035_060--Hb_000556_070 Hb_001141_060 Hb_001141_060 Hb_000035_060--Hb_001141_060 Hb_001499_070 Hb_001499_070 Hb_000035_060--Hb_001499_070 Hb_187005_010 Hb_187005_010 Hb_000035_060--Hb_187005_010 Hb_004976_080 Hb_004976_080 Hb_000035_060--Hb_004976_080 Hb_001386_020 Hb_001386_020 Hb_000035_060--Hb_001386_020 Hb_000365_220 Hb_000365_220 Hb_002888_040--Hb_000365_220 Hb_002888_040--Hb_026698_020 Hb_001689_030 Hb_001689_030 Hb_002888_040--Hb_001689_030 Hb_003517_100 Hb_003517_100 Hb_002888_040--Hb_003517_100 Hb_001195_230 Hb_001195_230 Hb_002888_040--Hb_001195_230 Hb_001268_300 Hb_001268_300 Hb_002888_040--Hb_001268_300 Hb_000665_200 Hb_000665_200 Hb_001969_130--Hb_000665_200 Hb_001124_140 Hb_001124_140 Hb_001969_130--Hb_001124_140 Hb_002026_030 Hb_002026_030 Hb_001969_130--Hb_002026_030 Hb_022425_050 Hb_022425_050 Hb_001969_130--Hb_022425_050 Hb_000066_040 Hb_000066_040 Hb_001969_130--Hb_000066_040 Hb_001221_300 Hb_001221_300 Hb_001969_130--Hb_001221_300 Hb_029748_020 Hb_029748_020 Hb_000321_120--Hb_029748_020 Hb_000340_360 Hb_000340_360 Hb_000321_120--Hb_000340_360 Hb_000221_180 Hb_000221_180 Hb_000321_120--Hb_000221_180 Hb_000175_270 Hb_000175_270 Hb_000321_120--Hb_000175_270 Hb_013399_090 Hb_013399_090 Hb_000321_120--Hb_013399_090 Hb_001269_050 Hb_001269_050 Hb_000321_120--Hb_001269_050 Hb_001514_240 Hb_001514_240 Hb_026698_020--Hb_001514_240 Hb_000417_410 Hb_000417_410 Hb_026698_020--Hb_000417_410 Hb_009449_100 Hb_009449_100 Hb_026698_020--Hb_009449_100 Hb_026698_020--Hb_001195_230 Hb_132840_030 Hb_132840_030 Hb_026698_020--Hb_132840_030 Hb_143629_200 Hb_143629_200 Hb_000959_010--Hb_143629_200 Hb_001486_100 Hb_001486_100 Hb_000959_010--Hb_001486_100 Hb_006040_170 Hb_006040_170 Hb_000959_010--Hb_006040_170 Hb_005305_030 Hb_005305_030 Hb_000959_010--Hb_005305_030 Hb_007237_010 Hb_007237_010 Hb_000959_010--Hb_007237_010 Hb_000237_160 Hb_000237_160 Hb_000959_010--Hb_000237_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0499581 0.604818 0.346451 0.371013 0.0144125 0.0534316
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0531436 0.0760483 0.226795 0.791475

CAGE analysis