Hb_000130_160

Information

Type -
Description -
Location Contig130: 132163-143741
Sequence    

Annotation

kegg
ID cic:CICLE_v10020189mg
description hypothetical protein
nr
ID XP_012078574.1
description PREDICTED: protein DJ-1 homolog B-like [Jatropha curcas]
swissprot
ID Q9MAH3
description Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=1 SV=1
trembl
ID A0A067K8S7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14725 PE=4 SV=1
Gene Ontology
ID GO:0016740
description protein dj-1 homolog b-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08893: 132156-143901 , PASA_asmbl_08894: 132156-140705
cDNA
(Sanger)
(ID:Location)		 006_P04.ab1: 143449-143890 , 013_G09.ab1: 132156-140557 , 034_E20.ab1: 143449-143890

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000130_160 0.0 - - PREDICTED: protein DJ-1 homolog B-like [Jatropha curcas]
2 Hb_001473_180 0.07968361 - - glutathione reductase [Hevea brasiliensis]
3 Hb_133702_030 0.0806947759 - - PREDICTED: uric acid degradation bifunctional protein TTL isoform X1 [Jatropha curcas]
4 Hb_003645_060 0.0871680125 - - PREDICTED: monodehydroascorbate reductase, chloroplastic [Jatropha curcas]
5 Hb_004411_030 0.0879054676 - - hypothetical protein POPTR_0017s00310g [Populus trichocarpa]
6 Hb_039946_050 0.0896098272 - - catalytic, putative [Ricinus communis]
7 Hb_000836_460 0.0911896144 - - PREDICTED: uncharacterized protein LOC105628435 [Jatropha curcas]
8 Hb_010174_040 0.0917822259 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]
9 Hb_002815_030 0.0924902519 - - hypothetical protein CISIN_1g0095162mg, partial [Citrus sinensis]
10 Hb_000592_030 0.0928336057 - - PREDICTED: uncharacterized protein LOC100853969 isoform X1 [Vitis vinifera]
11 Hb_000537_050 0.0932805881 - - AP-2 complex subunit beta-1, putative [Ricinus communis]
12 Hb_041327_010 0.093329593 - - PREDICTED: la-related protein 1A isoform X1 [Jatropha curcas]
13 Hb_001754_040 0.094444485 transcription factor TF Family: TRAF PREDICTED: uncharacterized protein LOC105643434 [Jatropha curcas]
14 Hb_019840_030 0.0949815534 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]
15 Hb_004586_220 0.0965156182 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
16 Hb_001105_020 0.0970010391 - - expressed protein, putative [Ricinus communis]
17 Hb_006569_030 0.09714668 - - PREDICTED: uncharacterized protein LOC105650907 isoform X1 [Jatropha curcas]
18 Hb_005333_050 0.098247661 - - PREDICTED: glucose-6-phosphate isomerase 1, chloroplastic [Jatropha curcas]
19 Hb_001733_030 0.0987962689 - - PREDICTED: uncharacterized protein LOC100261386 isoform X2 [Vitis vinifera]
20 Hb_000789_250 0.0990803216 - - PREDICTED: uncharacterized protein LOC105637809 [Jatropha curcas]

Gene co-expression network

sample Hb_000130_160 Hb_000130_160 Hb_001473_180 Hb_001473_180 Hb_000130_160--Hb_001473_180 Hb_133702_030 Hb_133702_030 Hb_000130_160--Hb_133702_030 Hb_003645_060 Hb_003645_060 Hb_000130_160--Hb_003645_060 Hb_004411_030 Hb_004411_030 Hb_000130_160--Hb_004411_030 Hb_039946_050 Hb_039946_050 Hb_000130_160--Hb_039946_050 Hb_000836_460 Hb_000836_460 Hb_000130_160--Hb_000836_460 Hb_000592_030 Hb_000592_030 Hb_001473_180--Hb_000592_030 Hb_002600_150 Hb_002600_150 Hb_001473_180--Hb_002600_150 Hb_009270_020 Hb_009270_020 Hb_001473_180--Hb_009270_020 Hb_009079_030 Hb_009079_030 Hb_001473_180--Hb_009079_030 Hb_000617_180 Hb_000617_180 Hb_001473_180--Hb_000617_180 Hb_002815_030 Hb_002815_030 Hb_001473_180--Hb_002815_030 Hb_001733_030 Hb_001733_030 Hb_133702_030--Hb_001733_030 Hb_000182_040 Hb_000182_040 Hb_133702_030--Hb_000182_040 Hb_001454_370 Hb_001454_370 Hb_133702_030--Hb_001454_370 Hb_000120_280 Hb_000120_280 Hb_133702_030--Hb_000120_280 Hb_007657_020 Hb_007657_020 Hb_133702_030--Hb_007657_020 Hb_000603_030 Hb_000603_030 Hb_133702_030--Hb_000603_030 Hb_000563_130 Hb_000563_130 Hb_003645_060--Hb_000563_130 Hb_004267_040 Hb_004267_040 Hb_003645_060--Hb_004267_040 Hb_001655_030 Hb_001655_030 Hb_003645_060--Hb_001655_030 Hb_003645_060--Hb_000603_030 Hb_010174_040 Hb_010174_040 Hb_003645_060--Hb_010174_040 Hb_000035_170 Hb_000035_170 Hb_003645_060--Hb_000035_170 Hb_041327_010 Hb_041327_010 Hb_004411_030--Hb_041327_010 Hb_000037_220 Hb_000037_220 Hb_004411_030--Hb_000037_220 Hb_001754_040 Hb_001754_040 Hb_004411_030--Hb_001754_040 Hb_140049_080 Hb_140049_080 Hb_004411_030--Hb_140049_080 Hb_000003_100 Hb_000003_100 Hb_004411_030--Hb_000003_100 Hb_019840_030 Hb_019840_030 Hb_004411_030--Hb_019840_030 Hb_005663_110 Hb_005663_110 Hb_039946_050--Hb_005663_110 Hb_039946_050--Hb_041327_010 Hb_179306_020 Hb_179306_020 Hb_039946_050--Hb_179306_020 Hb_000099_030 Hb_000099_030 Hb_039946_050--Hb_000099_030 Hb_000069_120 Hb_000069_120 Hb_039946_050--Hb_000069_120 Hb_000537_050 Hb_000537_050 Hb_039946_050--Hb_000537_050 Hb_000258_110 Hb_000258_110 Hb_000836_460--Hb_000258_110 Hb_003544_060 Hb_003544_060 Hb_000836_460--Hb_003544_060 Hb_004586_220 Hb_004586_220 Hb_000836_460--Hb_004586_220 Hb_005634_010 Hb_005634_010 Hb_000836_460--Hb_005634_010 Hb_003020_100 Hb_003020_100 Hb_000836_460--Hb_003020_100 Hb_000329_060 Hb_000329_060 Hb_000836_460--Hb_000329_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.3163 32.8261 35.4653 35.7418 37.3805 37.0377
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
29.8305 12.3449 32.0445 74.1895 39.3589

CAGE analysis