Hb_000025_380

Information

Type -
Description -
Location Contig25: 370205-370450
Sequence    

Annotation

kegg
ID pop:POPTR_0009s07450g
description POPTRDRAFT_557690; hypothetical protein
nr
ID KDP43235.1
description hypothetical protein JCGZ_22787 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFI0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000025_380 0.0 - - hypothetical protein JCGZ_22787 [Jatropha curcas]
2 Hb_006831_060 0.2674662586 - - hypothetical protein JCGZ_16419 [Jatropha curcas]
3 Hb_044662_050 0.2819647168 - - hypothetical protein POPTR_0002s08440g [Populus trichocarpa]
4 Hb_027472_110 0.2840848543 - - Patellin-4, putative [Ricinus communis]
5 Hb_004586_310 0.3217677247 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002400_170 0.3241896352 - - PREDICTED: adenine phosphoribosyltransferase 5 [Jatropha curcas]
7 Hb_002693_040 0.3259136586 - - hypersensitive-induced response protein [Carica papaya]
8 Hb_002631_090 0.3276051231 - - -
9 Hb_011316_070 0.3292466935 - - acyltransferase, putative [Ricinus communis]
10 Hb_000497_240 0.3306511955 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
11 Hb_002107_090 0.3310663176 transcription factor TF Family: bZIP Basic-leucine zipper transcription factor family protein, putative [Theobroma cacao]
12 Hb_000653_020 0.33128595 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Jatropha curcas]
13 Hb_001709_100 0.337010345 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
14 Hb_001722_090 0.3372989244 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
15 Hb_000500_370 0.3388776542 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
16 Hb_000321_080 0.3432417852 - - histone H4 [Zea mays]
17 Hb_002639_170 0.346426584 - - carboxy-lyase, putative [Ricinus communis]
18 Hb_153258_060 0.3480140978 - - -
19 Hb_000264_150 0.3486154154 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
20 Hb_002307_020 0.3505422275 - - PREDICTED: histone H1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000025_380 Hb_000025_380 Hb_006831_060 Hb_006831_060 Hb_000025_380--Hb_006831_060 Hb_044662_050 Hb_044662_050 Hb_000025_380--Hb_044662_050 Hb_027472_110 Hb_027472_110 Hb_000025_380--Hb_027472_110 Hb_004586_310 Hb_004586_310 Hb_000025_380--Hb_004586_310 Hb_002400_170 Hb_002400_170 Hb_000025_380--Hb_002400_170 Hb_002693_040 Hb_002693_040 Hb_000025_380--Hb_002693_040 Hb_007229_010 Hb_007229_010 Hb_006831_060--Hb_007229_010 Hb_001999_270 Hb_001999_270 Hb_006831_060--Hb_001999_270 Hb_153258_060 Hb_153258_060 Hb_006831_060--Hb_153258_060 Hb_015183_040 Hb_015183_040 Hb_006831_060--Hb_015183_040 Hb_005489_030 Hb_005489_030 Hb_006831_060--Hb_005489_030 Hb_000321_080 Hb_000321_080 Hb_044662_050--Hb_000321_080 Hb_002007_040 Hb_002007_040 Hb_044662_050--Hb_002007_040 Hb_002221_010 Hb_002221_010 Hb_044662_050--Hb_002221_010 Hb_004449_140 Hb_004449_140 Hb_044662_050--Hb_004449_140 Hb_000653_020 Hb_000653_020 Hb_044662_050--Hb_000653_020 Hb_002007_280 Hb_002007_280 Hb_044662_050--Hb_002007_280 Hb_003401_010 Hb_003401_010 Hb_027472_110--Hb_003401_010 Hb_005694_050 Hb_005694_050 Hb_027472_110--Hb_005694_050 Hb_054865_010 Hb_054865_010 Hb_027472_110--Hb_054865_010 Hb_004116_100 Hb_004116_100 Hb_027472_110--Hb_004116_100 Hb_002078_120 Hb_002078_120 Hb_027472_110--Hb_002078_120 Hb_027472_110--Hb_002007_040 Hb_005686_100 Hb_005686_100 Hb_004586_310--Hb_005686_100 Hb_114292_010 Hb_114292_010 Hb_004586_310--Hb_114292_010 Hb_005694_070 Hb_005694_070 Hb_004586_310--Hb_005694_070 Hb_001007_090 Hb_001007_090 Hb_004586_310--Hb_001007_090 Hb_001143_200 Hb_001143_200 Hb_004586_310--Hb_001143_200 Hb_004586_310--Hb_002221_010 Hb_006788_090 Hb_006788_090 Hb_002400_170--Hb_006788_090 Hb_004846_230 Hb_004846_230 Hb_002400_170--Hb_004846_230 Hb_002794_040 Hb_002794_040 Hb_002400_170--Hb_002794_040 Hb_010318_010 Hb_010318_010 Hb_002400_170--Hb_010318_010 Hb_003549_130 Hb_003549_130 Hb_002400_170--Hb_003549_130 Hb_000392_240 Hb_000392_240 Hb_002400_170--Hb_000392_240 Hb_010288_050 Hb_010288_050 Hb_002693_040--Hb_010288_050 Hb_002693_040--Hb_002221_010 Hb_007632_200 Hb_007632_200 Hb_002693_040--Hb_007632_200 Hb_000165_270 Hb_000165_270 Hb_002693_040--Hb_000165_270 Hb_002218_050 Hb_002218_050 Hb_002693_040--Hb_002218_050 Hb_008948_090 Hb_008948_090 Hb_002693_040--Hb_008948_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.905243 1.34405 17.0457 0 0 0.305915
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.27568 1.04752 0 0.738048 0.704168

CAGE analysis