Hb_010288_050

Information

Type -
Description -
Location Contig10288: 49103-52893
Sequence    

Annotation

kegg
ID rcu:RCOM_1347470
description triacylglycerol lipase, putative
nr
ID XP_012082872.1
description PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14009 PE=4 SV=1
Gene Ontology
ID GO:0006629
description alpha beta-hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01147: 52359-52923
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010288_050 0.0 - - PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
2 Hb_002693_040 0.1347496488 - - hypersensitive-induced response protein [Carica papaya]
3 Hb_007632_200 0.1592700477 - - hypothetical protein L484_018221 [Morus notabilis]
4 Hb_000165_270 0.1615863016 transcription factor TF Family: Tify JAZ10 [Hevea brasiliensis]
5 Hb_005162_120 0.1646109948 - - ferric reductase oxidase [Manihot esculenta]
6 Hb_008948_090 0.1664823974 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
7 Hb_006909_050 0.1665230541 transcription factor TF Family: OFP hypothetical protein POPTR_0008s01840g [Populus trichocarpa]
8 Hb_001102_030 0.1718763239 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
9 Hb_001040_050 0.1720007313 - - Stem-specific protein TSJT1, putative [Ricinus communis]
10 Hb_000731_030 0.1738255808 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
11 Hb_002221_010 0.1754232406 - - PREDICTED: adenylyl-sulfate kinase 3-like [Jatropha curcas]
12 Hb_001519_080 0.1779084053 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
13 Hb_000984_230 0.1802508475 - - -
14 Hb_007558_060 0.1855398025 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]
15 Hb_004881_040 0.1874949179 - - PREDICTED: protodermal factor 1-like [Populus euphratica]
16 Hb_000115_190 0.1889136552 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
17 Hb_177533_010 0.189884733 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
18 Hb_000261_530 0.1905827106 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
19 Hb_002639_170 0.1921771206 - - carboxy-lyase, putative [Ricinus communis]
20 Hb_000347_160 0.1930592145 transcription factor TF Family: Tify JAZ2 [Hevea brasiliensis]

Gene co-expression network

sample Hb_010288_050 Hb_010288_050 Hb_002693_040 Hb_002693_040 Hb_010288_050--Hb_002693_040 Hb_007632_200 Hb_007632_200 Hb_010288_050--Hb_007632_200 Hb_000165_270 Hb_000165_270 Hb_010288_050--Hb_000165_270 Hb_005162_120 Hb_005162_120 Hb_010288_050--Hb_005162_120 Hb_008948_090 Hb_008948_090 Hb_010288_050--Hb_008948_090 Hb_006909_050 Hb_006909_050 Hb_010288_050--Hb_006909_050 Hb_002221_010 Hb_002221_010 Hb_002693_040--Hb_002221_010 Hb_002693_040--Hb_007632_200 Hb_002693_040--Hb_000165_270 Hb_002218_050 Hb_002218_050 Hb_002693_040--Hb_002218_050 Hb_002693_040--Hb_008948_090 Hb_001040_050 Hb_001040_050 Hb_007632_200--Hb_001040_050 Hb_005839_080 Hb_005839_080 Hb_007632_200--Hb_005839_080 Hb_004650_040 Hb_004650_040 Hb_007632_200--Hb_004650_040 Hb_012633_010 Hb_012633_010 Hb_007632_200--Hb_012633_010 Hb_006519_020 Hb_006519_020 Hb_007632_200--Hb_006519_020 Hb_001102_030 Hb_001102_030 Hb_007632_200--Hb_001102_030 Hb_001433_120 Hb_001433_120 Hb_000165_270--Hb_001433_120 Hb_007218_010 Hb_007218_010 Hb_000165_270--Hb_007218_010 Hb_010672_040 Hb_010672_040 Hb_000165_270--Hb_010672_040 Hb_007157_050 Hb_007157_050 Hb_000165_270--Hb_007157_050 Hb_000347_160 Hb_000347_160 Hb_000165_270--Hb_000347_160 Hb_005854_060 Hb_005854_060 Hb_000165_270--Hb_005854_060 Hb_000115_190 Hb_000115_190 Hb_005162_120--Hb_000115_190 Hb_000028_250 Hb_000028_250 Hb_005162_120--Hb_000028_250 Hb_002639_170 Hb_002639_170 Hb_005162_120--Hb_002639_170 Hb_005162_120--Hb_002218_050 Hb_007002_050 Hb_007002_050 Hb_005162_120--Hb_007002_050 Hb_001241_020 Hb_001241_020 Hb_005162_120--Hb_001241_020 Hb_001061_010 Hb_001061_010 Hb_008948_090--Hb_001061_010 Hb_008948_090--Hb_006909_050 Hb_177533_010 Hb_177533_010 Hb_008948_090--Hb_177533_010 Hb_001519_080 Hb_001519_080 Hb_008948_090--Hb_001519_080 Hb_004881_040 Hb_004881_040 Hb_008948_090--Hb_004881_040 Hb_000592_120 Hb_000592_120 Hb_008948_090--Hb_000592_120 Hb_006909_050--Hb_177533_010 Hb_000243_180 Hb_000243_180 Hb_006909_050--Hb_000243_180 Hb_002045_020 Hb_002045_020 Hb_006909_050--Hb_002045_020 Hb_000023_030 Hb_000023_030 Hb_006909_050--Hb_000023_030 Hb_007558_060 Hb_007558_060 Hb_006909_050--Hb_007558_060 Hb_000731_030 Hb_000731_030 Hb_006909_050--Hb_000731_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00723459 0.214632 26.4778 1.49675 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.689387 0.736223 0.271222 0.543422 1.04484

CAGE analysis