Hb_000592_120

Information

Type transcription factor
Description TF Family: HB
Location Contig592: 176898-178915
Sequence    

Annotation

kegg
ID rcu:RCOM_0161240
description Protein WUSCHEL, putative
nr
ID XP_012088544.1
description PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
swissprot
ID Q6X7K0
description WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2
trembl
ID A0A067JV94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27080 PE=4 SV=1
Gene Ontology
ID GO:0005634
description wuschel-related homeobox 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50301: 176896-179034
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000592_120 0.0 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
2 Hb_000212_170 0.0629843775 - - PREDICTED: GDSL esterase/lipase At2g30310-like [Jatropha curcas]
3 Hb_162008_040 0.0655172265 - - hypothetical protein CL1725Contig1_03, partial [Pinus taeda]
4 Hb_121680_010 0.0809862095 - - PREDICTED: uncharacterized protein LOC105644052 isoform X2 [Jatropha curcas]
5 Hb_008252_010 0.0829210496 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
6 Hb_162008_020 0.0854548703 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
7 Hb_000077_430 0.0876490382 - - hypothetical protein POPTR_0019s13390g [Populus trichocarpa]
8 Hb_002843_200 0.0937150756 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001546_100 0.0938390641 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
10 Hb_078641_020 0.0944988532 - - Pectinesterase-2 precursor, putative [Ricinus communis]
11 Hb_002030_140 0.0946495855 - - PREDICTED: protein MIZU-KUSSEI 1-like [Jatropha curcas]
12 Hb_022929_010 0.0948987814 - - zinc/iron transporter, putative [Ricinus communis]
13 Hb_000680_080 0.0949882477 - - PREDICTED: protein HOTHEAD [Jatropha curcas]
14 Hb_012573_060 0.0957885663 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like [Vitis vinifera]
15 Hb_004019_130 0.0964262898 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
16 Hb_002376_020 0.0974001849 - - lectin, partial [Lathyrus palustris]
17 Hb_007157_050 0.0974776311 - - hypothetical protein RCOM_0711500 [Ricinus communis]
18 Hb_000129_060 0.0980121538 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
19 Hb_029879_040 0.0987097942 - - PREDICTED: cytochrome P450 77A4-like [Jatropha curcas]
20 Hb_005854_060 0.0999449505 - - short-chain dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000592_120 Hb_000592_120 Hb_000212_170 Hb_000212_170 Hb_000592_120--Hb_000212_170 Hb_162008_040 Hb_162008_040 Hb_000592_120--Hb_162008_040 Hb_121680_010 Hb_121680_010 Hb_000592_120--Hb_121680_010 Hb_008252_010 Hb_008252_010 Hb_000592_120--Hb_008252_010 Hb_162008_020 Hb_162008_020 Hb_000592_120--Hb_162008_020 Hb_000077_430 Hb_000077_430 Hb_000592_120--Hb_000077_430 Hb_000212_170--Hb_162008_040 Hb_002030_140 Hb_002030_140 Hb_000212_170--Hb_002030_140 Hb_022929_010 Hb_022929_010 Hb_000212_170--Hb_022929_010 Hb_000680_080 Hb_000680_080 Hb_000212_170--Hb_000680_080 Hb_001546_100 Hb_001546_100 Hb_000212_170--Hb_001546_100 Hb_012573_060 Hb_012573_060 Hb_000212_170--Hb_012573_060 Hb_162008_040--Hb_121680_010 Hb_162008_040--Hb_008252_010 Hb_005854_060 Hb_005854_060 Hb_162008_040--Hb_005854_060 Hb_162008_040--Hb_162008_020 Hb_162008_040--Hb_001546_100 Hb_121680_010--Hb_162008_020 Hb_121680_010--Hb_008252_010 Hb_004019_130 Hb_004019_130 Hb_121680_010--Hb_004019_130 Hb_000129_060 Hb_000129_060 Hb_121680_010--Hb_000129_060 Hb_121680_010--Hb_000212_170 Hb_008252_010--Hb_162008_020 Hb_002376_020 Hb_002376_020 Hb_008252_010--Hb_002376_020 Hb_005550_060 Hb_005550_060 Hb_008252_010--Hb_005550_060 Hb_008252_010--Hb_000212_170 Hb_003398_110 Hb_003398_110 Hb_162008_020--Hb_003398_110 Hb_000190_200 Hb_000190_200 Hb_162008_020--Hb_000190_200 Hb_162008_020--Hb_002376_020 Hb_000077_430--Hb_002030_140 Hb_000077_430--Hb_022929_010 Hb_000077_430--Hb_000680_080 Hb_000077_430--Hb_001546_100 Hb_000077_430--Hb_012573_060 Hb_014109_030 Hb_014109_030 Hb_000077_430--Hb_014109_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 12.1912 0.696167 0 0.03289
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.124806 0 0.0694089

CAGE analysis