Hb_162008_040

Information

Type -
Description -
Location Contig162008: 11915-12136
Sequence    

Annotation

kegg
ID fve:101299191
description cytochrome P450 89A2-like isoform 1
nr
ID AFG45245.1
description hypothetical protein CL1725Contig1_03, partial [Pinus taeda]
swissprot
ID Q9SRQ1
description Cytochrome P450 89A9 OS=Arabidopsis thaliana GN=CYP89A9 PE=2 SV=1
trembl
ID H9V652
description Uncharacterized protein (Fragment) OS=Pinus taeda GN=CL1725Contig1_03 PE=3 SV=1
Gene Ontology
ID GO:0005506
description flavonoid 3 -hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14600: 10447-11301
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162008_040 0.0 - - hypothetical protein CL1725Contig1_03, partial [Pinus taeda]
2 Hb_000212_170 0.0285297858 - - PREDICTED: GDSL esterase/lipase At2g30310-like [Jatropha curcas]
3 Hb_121680_010 0.0400765063 - - PREDICTED: uncharacterized protein LOC105644052 isoform X2 [Jatropha curcas]
4 Hb_008252_010 0.048046622 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
5 Hb_005854_060 0.0529431878 - - short-chain dehydrogenase, putative [Ricinus communis]
6 Hb_162008_020 0.0546297278 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
7 Hb_001546_100 0.0565887513 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
8 Hb_002030_140 0.0575586566 - - PREDICTED: protein MIZU-KUSSEI 1-like [Jatropha curcas]
9 Hb_022929_010 0.0578815122 - - zinc/iron transporter, putative [Ricinus communis]
10 Hb_000680_080 0.0579989662 - - PREDICTED: protein HOTHEAD [Jatropha curcas]
11 Hb_012573_060 0.0590739907 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like [Vitis vinifera]
12 Hb_004019_130 0.0627481718 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
13 Hb_001680_060 0.0633622393 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000129_060 0.0654791102 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
15 Hb_000592_120 0.0655172265 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
16 Hb_000077_430 0.0693484186 - - hypothetical protein POPTR_0019s13390g [Populus trichocarpa]
17 Hb_002376_020 0.0693511516 - - lectin, partial [Lathyrus palustris]
18 Hb_007218_010 0.0710191587 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X1 [Populus euphratica]
19 Hb_007157_050 0.0716797062 - - hypothetical protein RCOM_0711500 [Ricinus communis]
20 Hb_002028_230 0.0717059677 - - Pectinesterase-3 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_162008_040 Hb_162008_040 Hb_000212_170 Hb_000212_170 Hb_162008_040--Hb_000212_170 Hb_121680_010 Hb_121680_010 Hb_162008_040--Hb_121680_010 Hb_008252_010 Hb_008252_010 Hb_162008_040--Hb_008252_010 Hb_005854_060 Hb_005854_060 Hb_162008_040--Hb_005854_060 Hb_162008_020 Hb_162008_020 Hb_162008_040--Hb_162008_020 Hb_001546_100 Hb_001546_100 Hb_162008_040--Hb_001546_100 Hb_002030_140 Hb_002030_140 Hb_000212_170--Hb_002030_140 Hb_022929_010 Hb_022929_010 Hb_000212_170--Hb_022929_010 Hb_000680_080 Hb_000680_080 Hb_000212_170--Hb_000680_080 Hb_000212_170--Hb_001546_100 Hb_012573_060 Hb_012573_060 Hb_000212_170--Hb_012573_060 Hb_121680_010--Hb_162008_020 Hb_121680_010--Hb_008252_010 Hb_004019_130 Hb_004019_130 Hb_121680_010--Hb_004019_130 Hb_000129_060 Hb_000129_060 Hb_121680_010--Hb_000129_060 Hb_121680_010--Hb_000212_170 Hb_008252_010--Hb_162008_020 Hb_002376_020 Hb_002376_020 Hb_008252_010--Hb_002376_020 Hb_005550_060 Hb_005550_060 Hb_008252_010--Hb_005550_060 Hb_008252_010--Hb_000212_170 Hb_001680_060 Hb_001680_060 Hb_005854_060--Hb_001680_060 Hb_021622_010 Hb_021622_010 Hb_005854_060--Hb_021622_010 Hb_007218_010 Hb_007218_010 Hb_005854_060--Hb_007218_010 Hb_005854_060--Hb_000212_170 Hb_005854_060--Hb_012573_060 Hb_003398_110 Hb_003398_110 Hb_162008_020--Hb_003398_110 Hb_000190_200 Hb_000190_200 Hb_162008_020--Hb_000190_200 Hb_162008_020--Hb_002376_020 Hb_001546_100--Hb_002030_140 Hb_001546_100--Hb_022929_010 Hb_001546_100--Hb_000680_080 Hb_001546_100--Hb_012573_060 Hb_001546_100--Hb_004019_130 Hb_000077_430 Hb_000077_430 Hb_001546_100--Hb_000077_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.572214 630.678 37.3612 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.883155 0 2.7905

CAGE analysis