Hb_162008_020

Information

Type -
Description -
Location Contig162008: 2174-11521
Sequence    

Annotation

kegg
ID vvi:100232999
description F3'H, VvF3'h4; flavonoid 3' hydroxylase
nr
ID XP_012080364.1
description PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
swissprot
ID Q9SD85
description Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1
trembl
ID A0A067KHL9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11710 PE=3 SV=1
Gene Ontology
ID GO:0005506
description flavonoid 3 -hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14600: 10447-11301
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162008_020 0.0 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]
2 Hb_008252_010 0.0239665855 transcription factor TF Family: C2C2-YABBY PREDICTED: protein YABBY 4 [Vitis vinifera]
3 Hb_121680_010 0.0373253293 - - PREDICTED: uncharacterized protein LOC105644052 isoform X2 [Jatropha curcas]
4 Hb_162008_040 0.0546297278 - - hypothetical protein CL1725Contig1_03, partial [Pinus taeda]
5 Hb_003398_110 0.0573907377 - - PREDICTED: uncharacterized protein LOC105647583 [Jatropha curcas]
6 Hb_000190_200 0.0578297288 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
7 Hb_002376_020 0.0589829277 - - lectin, partial [Lathyrus palustris]
8 Hb_004881_040 0.0599794194 - - PREDICTED: protodermal factor 1-like [Populus euphratica]
9 Hb_000544_150 0.0670150691 transcription factor TF Family: HB PREDICTED: WUSCHEL-related homeobox 1 [Jatropha curcas]
10 Hb_001680_060 0.0673234693 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000212_170 0.0684336917 - - PREDICTED: GDSL esterase/lipase At2g30310-like [Jatropha curcas]
12 Hb_005550_060 0.0702830244 transcription factor TF Family: MYB-related transcription factor, putative [Ricinus communis]
13 Hb_007157_050 0.0713174975 - - hypothetical protein RCOM_0711500 [Ricinus communis]
14 Hb_000329_220 0.0744584585 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]
15 Hb_004019_130 0.0805061075 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
16 Hb_000129_060 0.0815056837 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
17 Hb_001546_100 0.0828378615 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
18 Hb_005854_060 0.0839284086 - - short-chain dehydrogenase, putative [Ricinus communis]
19 Hb_002030_140 0.0846812041 - - PREDICTED: protein MIZU-KUSSEI 1-like [Jatropha curcas]
20 Hb_007741_010 0.0849474382 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 1 [Jatropha curcas]

Gene co-expression network

sample Hb_162008_020 Hb_162008_020 Hb_008252_010 Hb_008252_010 Hb_162008_020--Hb_008252_010 Hb_121680_010 Hb_121680_010 Hb_162008_020--Hb_121680_010 Hb_162008_040 Hb_162008_040 Hb_162008_020--Hb_162008_040 Hb_003398_110 Hb_003398_110 Hb_162008_020--Hb_003398_110 Hb_000190_200 Hb_000190_200 Hb_162008_020--Hb_000190_200 Hb_002376_020 Hb_002376_020 Hb_162008_020--Hb_002376_020 Hb_008252_010--Hb_002376_020 Hb_008252_010--Hb_121680_010 Hb_008252_010--Hb_162008_040 Hb_005550_060 Hb_005550_060 Hb_008252_010--Hb_005550_060 Hb_000212_170 Hb_000212_170 Hb_008252_010--Hb_000212_170 Hb_121680_010--Hb_162008_040 Hb_004019_130 Hb_004019_130 Hb_121680_010--Hb_004019_130 Hb_000129_060 Hb_000129_060 Hb_121680_010--Hb_000129_060 Hb_121680_010--Hb_000212_170 Hb_162008_040--Hb_000212_170 Hb_005854_060 Hb_005854_060 Hb_162008_040--Hb_005854_060 Hb_001546_100 Hb_001546_100 Hb_162008_040--Hb_001546_100 Hb_003398_110--Hb_121680_010 Hb_003398_110--Hb_008252_010 Hb_003398_110--Hb_000190_200 Hb_007157_050 Hb_007157_050 Hb_003398_110--Hb_007157_050 Hb_162008_030 Hb_162008_030 Hb_003398_110--Hb_162008_030 Hb_000329_220 Hb_000329_220 Hb_000190_200--Hb_000329_220 Hb_004881_040 Hb_004881_040 Hb_000190_200--Hb_004881_040 Hb_007741_010 Hb_007741_010 Hb_000190_200--Hb_007741_010 Hb_000544_150 Hb_000544_150 Hb_000190_200--Hb_000544_150 Hb_000190_200--Hb_008252_010 Hb_002376_020--Hb_005550_060 Hb_006485_020 Hb_006485_020 Hb_002376_020--Hb_006485_020 Hb_005170_050 Hb_005170_050 Hb_002376_020--Hb_005170_050 Hb_000155_280 Hb_000155_280 Hb_002376_020--Hb_000155_280 Hb_000005_390 Hb_000005_390 Hb_002376_020--Hb_000005_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 9.26817 0.460408 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.124634

CAGE analysis