Hb_162008_030

Information

Type -
Description -
Location Contig162008: 11545-11884
Sequence    

Annotation

kegg
ID osa:9266927
description Os10g0196100
nr
ID AAX51194.1
description cytochrome p450 [Ageratina adenophora]
swissprot
ID Q5IZM4
description Lanosterol 14-alpha demethylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=cyp51 PE=3 SV=1
trembl
ID Q58G91
description Cytochrome p450 (Fragment) OS=Ageratina adenophora GN=CYP75 PE=2 SV=1
Gene Ontology
ID GO:0005506
description flavonoid 3 -hydroxylase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14600: 10447-11301
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162008_030 0.0 - - cytochrome p450 [Ageratina adenophora]
2 Hb_000129_060 0.0169704508 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
3 Hb_004019_130 0.0227013473 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
4 Hb_149407_010 0.0245099256 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
5 Hb_029879_040 0.0340507323 - - PREDICTED: cytochrome P450 77A4-like [Jatropha curcas]
6 Hb_002028_230 0.0388544315 - - Pectinesterase-3 precursor, putative [Ricinus communis]
7 Hb_001546_100 0.056466509 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
8 Hb_121680_010 0.0567459013 - - PREDICTED: uncharacterized protein LOC105644052 isoform X2 [Jatropha curcas]
9 Hb_002030_140 0.0624670247 - - PREDICTED: protein MIZU-KUSSEI 1-like [Jatropha curcas]
10 Hb_022929_010 0.0638975643 - - zinc/iron transporter, putative [Ricinus communis]
11 Hb_000680_080 0.0643833501 - - PREDICTED: protein HOTHEAD [Jatropha curcas]
12 Hb_078641_020 0.0654491792 - - Pectinesterase-2 precursor, putative [Ricinus communis]
13 Hb_003411_080 0.0666595912 - - conserved hypothetical protein [Ricinus communis]
14 Hb_012573_060 0.0682568155 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like [Vitis vinifera]
15 Hb_000077_430 0.0729784909 - - hypothetical protein POPTR_0019s13390g [Populus trichocarpa]
16 Hb_162008_040 0.0754908634 - - hypothetical protein CL1725Contig1_03, partial [Pinus taeda]
17 Hb_000212_170 0.075574694 - - PREDICTED: GDSL esterase/lipase At2g30310-like [Jatropha curcas]
18 Hb_000753_220 0.0775941505 - - hypothetical protein RCOM_1467930 [Ricinus communis]
19 Hb_003398_110 0.0805205733 - - PREDICTED: uncharacterized protein LOC105647583 [Jatropha curcas]
20 Hb_162008_020 0.0866176367 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]

Gene co-expression network

sample Hb_162008_030 Hb_162008_030 Hb_000129_060 Hb_000129_060 Hb_162008_030--Hb_000129_060 Hb_004019_130 Hb_004019_130 Hb_162008_030--Hb_004019_130 Hb_149407_010 Hb_149407_010 Hb_162008_030--Hb_149407_010 Hb_029879_040 Hb_029879_040 Hb_162008_030--Hb_029879_040 Hb_002028_230 Hb_002028_230 Hb_162008_030--Hb_002028_230 Hb_001546_100 Hb_001546_100 Hb_162008_030--Hb_001546_100 Hb_000129_060--Hb_004019_130 Hb_000129_060--Hb_029879_040 Hb_000129_060--Hb_001546_100 Hb_000129_060--Hb_002028_230 Hb_000129_060--Hb_149407_010 Hb_004019_130--Hb_001546_100 Hb_002030_140 Hb_002030_140 Hb_004019_130--Hb_002030_140 Hb_022929_010 Hb_022929_010 Hb_004019_130--Hb_022929_010 Hb_004019_130--Hb_029879_040 Hb_149407_010--Hb_029879_040 Hb_149407_010--Hb_004019_130 Hb_149407_010--Hb_002028_230 Hb_003411_080 Hb_003411_080 Hb_149407_010--Hb_003411_080 Hb_029879_040--Hb_002028_230 Hb_000077_430 Hb_000077_430 Hb_029879_040--Hb_000077_430 Hb_002028_230--Hb_003411_080 Hb_002028_230--Hb_004019_130 Hb_001546_100--Hb_002030_140 Hb_001546_100--Hb_022929_010 Hb_000680_080 Hb_000680_080 Hb_001546_100--Hb_000680_080 Hb_012573_060 Hb_012573_060 Hb_001546_100--Hb_012573_060 Hb_001546_100--Hb_000077_430
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 34.4174 1.12934 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis