Hb_149407_010

Information

Type -
Description -
Location Contig149407: 5096-5853
Sequence    

Annotation

kegg
ID cic:CICLE_v10016616mg
description hypothetical protein
nr
ID XP_012084640.1
description PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LDE8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15083 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_149407_010 0.0 - - PREDICTED: uncharacterized protein LOC105643999 [Jatropha curcas]
2 Hb_162008_030 0.0245099256 - - cytochrome p450 [Ageratina adenophora]
3 Hb_029879_040 0.0412091089 - - PREDICTED: cytochrome P450 77A4-like [Jatropha curcas]
4 Hb_000129_060 0.0413864661 - - PREDICTED: fatty acyl-CoA reductase 2-like isoform X1 [Populus euphratica]
5 Hb_004019_130 0.0470721216 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 6 [Jatropha curcas]
6 Hb_002028_230 0.0490147347 - - Pectinesterase-3 precursor, putative [Ricinus communis]
7 Hb_003411_080 0.0636017777 - - conserved hypothetical protein [Ricinus communis]
8 Hb_078641_020 0.0706710873 - - Pectinesterase-2 precursor, putative [Ricinus communis]
9 Hb_121680_010 0.0711364774 - - PREDICTED: uncharacterized protein LOC105644052 isoform X2 [Jatropha curcas]
10 Hb_001546_100 0.0804676939 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
11 Hb_003398_110 0.08140813 - - PREDICTED: uncharacterized protein LOC105647583 [Jatropha curcas]
12 Hb_002030_140 0.0863882345 - - PREDICTED: protein MIZU-KUSSEI 1-like [Jatropha curcas]
13 Hb_000753_220 0.0871079064 - - hypothetical protein RCOM_1467930 [Ricinus communis]
14 Hb_022929_010 0.0877992128 - - zinc/iron transporter, putative [Ricinus communis]
15 Hb_000680_080 0.0882783146 - - PREDICTED: protein HOTHEAD [Jatropha curcas]
16 Hb_012573_060 0.0920977618 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like [Vitis vinifera]
17 Hb_162008_040 0.0932654264 - - hypothetical protein CL1725Contig1_03, partial [Pinus taeda]
18 Hb_000077_430 0.0940673622 - - hypothetical protein POPTR_0019s13390g [Populus trichocarpa]
19 Hb_000212_170 0.0958551995 - - PREDICTED: GDSL esterase/lipase At2g30310-like [Jatropha curcas]
20 Hb_162008_020 0.0986365514 - - PREDICTED: flavonoid 3'-monooxygenase [Jatropha curcas]

Gene co-expression network

sample Hb_149407_010 Hb_149407_010 Hb_162008_030 Hb_162008_030 Hb_149407_010--Hb_162008_030 Hb_029879_040 Hb_029879_040 Hb_149407_010--Hb_029879_040 Hb_000129_060 Hb_000129_060 Hb_149407_010--Hb_000129_060 Hb_004019_130 Hb_004019_130 Hb_149407_010--Hb_004019_130 Hb_002028_230 Hb_002028_230 Hb_149407_010--Hb_002028_230 Hb_003411_080 Hb_003411_080 Hb_149407_010--Hb_003411_080 Hb_162008_030--Hb_000129_060 Hb_162008_030--Hb_004019_130 Hb_162008_030--Hb_029879_040 Hb_162008_030--Hb_002028_230 Hb_001546_100 Hb_001546_100 Hb_162008_030--Hb_001546_100 Hb_029879_040--Hb_000129_060 Hb_029879_040--Hb_004019_130 Hb_029879_040--Hb_002028_230 Hb_000077_430 Hb_000077_430 Hb_029879_040--Hb_000077_430 Hb_000129_060--Hb_004019_130 Hb_000129_060--Hb_001546_100 Hb_000129_060--Hb_002028_230 Hb_004019_130--Hb_001546_100 Hb_002030_140 Hb_002030_140 Hb_004019_130--Hb_002030_140 Hb_022929_010 Hb_022929_010 Hb_004019_130--Hb_022929_010 Hb_002028_230--Hb_003411_080 Hb_002028_230--Hb_004019_130 Hb_000206_080 Hb_000206_080 Hb_003411_080--Hb_000206_080 Hb_003411_080--Hb_162008_030 Hb_003411_080--Hb_000129_060 Hb_003411_080--Hb_029879_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.28775 0.0524731 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis