Hb_005489_030

Information

Type -
Description -
Location Contig5489: 28797-31082
Sequence    

Annotation

kegg
ID vvi:104878699
description probable protein S-acyltransferase 14
nr
ID XP_012066562.1
description PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
swissprot
ID Q8VYP5
description Probable protein S-acyltransferase 14 OS=Arabidopsis thaliana GN=PAT14 PE=2 SV=1
trembl
ID A0A067LDI5
description S-acyltransferase OS=Jatropha curcas GN=JCGZ_24334 PE=3 SV=1
Gene Ontology
ID GO:0016740
description probable protein s-acyltransferase 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_48151: 26327-28835 , PASA_asmbl_48153: 29827-29964
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005489_030 0.0 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
2 Hb_001431_110 0.2681007755 - - glycerol-3-phosphate transporter family protein [Populus trichocarpa]
3 Hb_001016_010 0.2836689315 - - conserved hypothetical protein [Ricinus communis]
4 Hb_127743_020 0.3002027532 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 isoform X2 [Jatropha curcas]
5 Hb_001999_270 0.3022765568 - - PREDICTED: uncharacterized protein LOC105644961 [Jatropha curcas]
6 Hb_006831_060 0.3241578329 - - hypothetical protein JCGZ_16419 [Jatropha curcas]
7 Hb_004545_020 0.325287265 - - PREDICTED: transmembrane protein adipocyte-associated 1-like [Populus euphratica]
8 Hb_001300_210 0.3372778894 transcription factor TF Family: ARF PREDICTED: auxin response factor 23-like [Jatropha curcas]
9 Hb_007853_020 0.3482333959 - - protein BOLA2 [Jatropha curcas]
10 Hb_007594_100 0.3498602399 transcription factor TF Family: MIKC mads box protein, putative [Ricinus communis]
11 Hb_000139_490 0.3515067425 - - PREDICTED: transcription factor MUTE [Jatropha curcas]
12 Hb_003078_060 0.3531484494 - - 60S ribosomal protein L32, putative [Ricinus communis]
13 Hb_105061_010 0.3541983774 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
14 Hb_056196_040 0.3605902053 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006634_060 0.3612458853 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
16 Hb_000138_050 0.3614523662 transcription factor TF Family: HB Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
17 Hb_003750_070 0.362361282 - - PREDICTED: psbQ-like protein 3, chloroplastic [Jatropha curcas]
18 Hb_008994_010 0.3647818451 - - Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
19 Hb_002411_060 0.365378755 - - PREDICTED: 65-kDa microtubule-associated protein 5 [Jatropha curcas]
20 Hb_002194_080 0.3663227118 - - PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_005489_030 Hb_005489_030 Hb_001431_110 Hb_001431_110 Hb_005489_030--Hb_001431_110 Hb_001016_010 Hb_001016_010 Hb_005489_030--Hb_001016_010 Hb_127743_020 Hb_127743_020 Hb_005489_030--Hb_127743_020 Hb_001999_270 Hb_001999_270 Hb_005489_030--Hb_001999_270 Hb_006831_060 Hb_006831_060 Hb_005489_030--Hb_006831_060 Hb_004545_020 Hb_004545_020 Hb_005489_030--Hb_004545_020 Hb_003078_060 Hb_003078_060 Hb_001431_110--Hb_003078_060 Hb_000679_120 Hb_000679_120 Hb_001431_110--Hb_000679_120 Hb_003750_070 Hb_003750_070 Hb_001431_110--Hb_003750_070 Hb_000321_080 Hb_000321_080 Hb_001431_110--Hb_000321_080 Hb_001431_110--Hb_004545_020 Hb_004162_230 Hb_004162_230 Hb_001016_010--Hb_004162_230 Hb_000544_030 Hb_000544_030 Hb_001016_010--Hb_000544_030 Hb_002411_060 Hb_002411_060 Hb_001016_010--Hb_002411_060 Hb_025214_120 Hb_025214_120 Hb_001016_010--Hb_025214_120 Hb_010998_050 Hb_010998_050 Hb_001016_010--Hb_010998_050 Hb_030627_070 Hb_030627_070 Hb_001016_010--Hb_030627_070 Hb_008994_010 Hb_008994_010 Hb_127743_020--Hb_008994_010 Hb_002397_060 Hb_002397_060 Hb_127743_020--Hb_002397_060 Hb_127743_020--Hb_004545_020 Hb_127743_020--Hb_001016_010 Hb_002259_200 Hb_002259_200 Hb_127743_020--Hb_002259_200 Hb_015183_040 Hb_015183_040 Hb_001999_270--Hb_015183_040 Hb_105061_010 Hb_105061_010 Hb_001999_270--Hb_105061_010 Hb_034243_030 Hb_034243_030 Hb_001999_270--Hb_034243_030 Hb_001999_270--Hb_006831_060 Hb_009083_040 Hb_009083_040 Hb_001999_270--Hb_009083_040 Hb_007229_010 Hb_007229_010 Hb_006831_060--Hb_007229_010 Hb_000025_380 Hb_000025_380 Hb_006831_060--Hb_000025_380 Hb_153258_060 Hb_153258_060 Hb_006831_060--Hb_153258_060 Hb_006831_060--Hb_015183_040 Hb_001300_210 Hb_001300_210 Hb_004545_020--Hb_001300_210 Hb_004545_020--Hb_002259_200 Hb_004545_020--Hb_003750_070 Hb_001252_240 Hb_001252_240 Hb_004545_020--Hb_001252_240 Hb_004545_020--Hb_001016_010 Hb_008062_040 Hb_008062_040 Hb_004545_020--Hb_008062_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.118813 0 0.281023 0.0691769 0 0.114496
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.139242 0 0 0.0455709 0

CAGE analysis