Hb_009083_040

Information

Type -
Description -
Location Contig9083: 28218-29145
Sequence    

Annotation

kegg
ID rcu:RCOM_0581610
description hypothetical protein
nr
ID KDP32102.1
description hypothetical protein JCGZ_12563 [Jatropha curcas]
swissprot
ID Q9SY57
description Protein PHLOEM PROTEIN 2-LIKE A10 OS=Arabidopsis thaliana GN=PP2A10 PE=2 SV=1
trembl
ID A0A067K7K1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12563 PE=4 SV=1
Gene Ontology
ID GO:0009743
description protein phloem protein 2-like a10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009083_040 0.0 - - hypothetical protein JCGZ_12563 [Jatropha curcas]
2 Hb_000212_480 0.1297841658 - - -
3 Hb_001999_270 0.3013813645 - - PREDICTED: uncharacterized protein LOC105644961 [Jatropha curcas]
4 Hb_000377_100 0.3117825572 - - LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like protein [Theobroma cacao]
5 Hb_004324_170 0.3178505671 - - -
6 Hb_007545_040 0.3179434922 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
7 Hb_162189_010 0.3181319384 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_156850_010 0.3217519082 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
9 Hb_001080_110 0.3219887798 - - -
10 Hb_001247_340 0.3288146411 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
11 Hb_132840_040 0.3398505106 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
12 Hb_000093_070 0.3431457095 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
13 Hb_087999_010 0.3433986655 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
14 Hb_004491_020 0.3502390653 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
15 Hb_000264_150 0.3538874249 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
16 Hb_002272_190 0.3569881934 - - Kinesin heavy chain, putative [Ricinus communis]
17 Hb_001136_120 0.3602063539 - - -
18 Hb_009078_040 0.3630886644 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
19 Hb_001722_090 0.3673432162 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
20 Hb_001709_100 0.3677449427 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_009083_040 Hb_009083_040 Hb_000212_480 Hb_000212_480 Hb_009083_040--Hb_000212_480 Hb_001999_270 Hb_001999_270 Hb_009083_040--Hb_001999_270 Hb_000377_100 Hb_000377_100 Hb_009083_040--Hb_000377_100 Hb_004324_170 Hb_004324_170 Hb_009083_040--Hb_004324_170 Hb_007545_040 Hb_007545_040 Hb_009083_040--Hb_007545_040 Hb_162189_010 Hb_162189_010 Hb_009083_040--Hb_162189_010 Hb_000212_480--Hb_000377_100 Hb_000212_480--Hb_001999_270 Hb_001136_120 Hb_001136_120 Hb_000212_480--Hb_001136_120 Hb_001080_110 Hb_001080_110 Hb_000212_480--Hb_001080_110 Hb_002272_190 Hb_002272_190 Hb_000212_480--Hb_002272_190 Hb_015183_040 Hb_015183_040 Hb_001999_270--Hb_015183_040 Hb_105061_010 Hb_105061_010 Hb_001999_270--Hb_105061_010 Hb_034243_030 Hb_034243_030 Hb_001999_270--Hb_034243_030 Hb_006831_060 Hb_006831_060 Hb_001999_270--Hb_006831_060 Hb_005489_030 Hb_005489_030 Hb_001999_270--Hb_005489_030 Hb_002194_080 Hb_002194_080 Hb_000377_100--Hb_002194_080 Hb_048110_010 Hb_048110_010 Hb_000377_100--Hb_048110_010 Hb_004449_190 Hb_004449_190 Hb_000377_100--Hb_004449_190 Hb_002352_040 Hb_002352_040 Hb_000377_100--Hb_002352_040 Hb_004324_170--Hb_007545_040 Hb_004324_170--Hb_162189_010 Hb_156850_010 Hb_156850_010 Hb_004324_170--Hb_156850_010 Hb_001247_340 Hb_001247_340 Hb_004324_170--Hb_001247_340 Hb_132840_040 Hb_132840_040 Hb_004324_170--Hb_132840_040 Hb_000093_070 Hb_000093_070 Hb_004324_170--Hb_000093_070 Hb_007545_040--Hb_162189_010 Hb_007545_040--Hb_156850_010 Hb_007545_040--Hb_001247_340 Hb_007545_040--Hb_132840_040 Hb_007545_040--Hb_000093_070 Hb_162189_010--Hb_156850_010 Hb_162189_010--Hb_001247_340 Hb_162189_010--Hb_132840_040 Hb_004491_020 Hb_004491_020 Hb_162189_010--Hb_004491_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0822163 0 0 0.0480032
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.125163 0 0 0 0

CAGE analysis