Hb_001136_120

Information

Type -
Description -
Location Contig1136: 125313-126004
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001136_120 0.0 - - -
2 Hb_007416_040 0.2727606835 - - glutamate receptor 2 plant, putative [Ricinus communis]
3 Hb_002272_190 0.3077472269 - - Kinesin heavy chain, putative [Ricinus communis]
4 Hb_012532_030 0.3170487296 - - -
5 Hb_171529_010 0.3287735712 - - -
6 Hb_000212_480 0.3390449076 - - -
7 Hb_156554_010 0.3411436102 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
8 Hb_015401_010 0.3479123251 - - hypothetical protein VITISV_001548 [Vitis vinifera]
9 Hb_000094_260 0.352610211 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009083_040 0.3602063539 - - hypothetical protein JCGZ_12563 [Jatropha curcas]
11 Hb_092449_010 0.3652840941 - - -
12 Hb_078604_010 0.3689708823 - - -
13 Hb_011349_010 0.3733173274 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
14 Hb_000200_320 0.387083768 transcription factor TF Family: AUX/IAA hypothetical protein JCGZ_09311 [Jatropha curcas]
15 Hb_000181_190 0.3907985079 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
16 Hb_000348_040 0.3975921599 - - -
17 Hb_001195_430 0.3999163852 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000123_200 0.4005921242 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
19 Hb_003078_060 0.4010440218 - - 60S ribosomal protein L32, putative [Ricinus communis]
20 Hb_160366_010 0.4049473021 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_001136_120 Hb_001136_120 Hb_007416_040 Hb_007416_040 Hb_001136_120--Hb_007416_040 Hb_002272_190 Hb_002272_190 Hb_001136_120--Hb_002272_190 Hb_012532_030 Hb_012532_030 Hb_001136_120--Hb_012532_030 Hb_171529_010 Hb_171529_010 Hb_001136_120--Hb_171529_010 Hb_000212_480 Hb_000212_480 Hb_001136_120--Hb_000212_480 Hb_156554_010 Hb_156554_010 Hb_001136_120--Hb_156554_010 Hb_000123_200 Hb_000123_200 Hb_007416_040--Hb_000123_200 Hb_160366_010 Hb_160366_010 Hb_007416_040--Hb_160366_010 Hb_000094_260 Hb_000094_260 Hb_007416_040--Hb_000094_260 Hb_007416_040--Hb_002272_190 Hb_011349_010 Hb_011349_010 Hb_007416_040--Hb_011349_010 Hb_001865_110 Hb_001865_110 Hb_007416_040--Hb_001865_110 Hb_002272_190--Hb_001865_110 Hb_005222_020 Hb_005222_020 Hb_002272_190--Hb_005222_020 Hb_002272_190--Hb_000094_260 Hb_007761_050 Hb_007761_050 Hb_002272_190--Hb_007761_050 Hb_078604_010 Hb_078604_010 Hb_012532_030--Hb_078604_010 Hb_008442_010 Hb_008442_010 Hb_012532_030--Hb_008442_010 Hb_015401_010 Hb_015401_010 Hb_012532_030--Hb_015401_010 Hb_004374_180 Hb_004374_180 Hb_012532_030--Hb_004374_180 Hb_001405_130 Hb_001405_130 Hb_012532_030--Hb_001405_130 Hb_013492_010 Hb_013492_010 Hb_012532_030--Hb_013492_010 Hb_000347_510 Hb_000347_510 Hb_171529_010--Hb_000347_510 Hb_000931_030 Hb_000931_030 Hb_171529_010--Hb_000931_030 Hb_004586_450 Hb_004586_450 Hb_171529_010--Hb_004586_450 Hb_007574_060 Hb_007574_060 Hb_171529_010--Hb_007574_060 Hb_171529_010--Hb_008442_010 Hb_171529_010--Hb_078604_010 Hb_009083_040 Hb_009083_040 Hb_000212_480--Hb_009083_040 Hb_000377_100 Hb_000377_100 Hb_000212_480--Hb_000377_100 Hb_001999_270 Hb_001999_270 Hb_000212_480--Hb_001999_270 Hb_001080_110 Hb_001080_110 Hb_000212_480--Hb_001080_110 Hb_000212_480--Hb_002272_190 Hb_156554_010--Hb_011349_010 Hb_156554_010--Hb_000123_200 Hb_156554_010--Hb_160366_010 Hb_002099_010 Hb_002099_010 Hb_156554_010--Hb_002099_010 Hb_156554_010--Hb_007416_040 Hb_000613_150 Hb_000613_150 Hb_156554_010--Hb_000613_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.449217 0 0 0.307999
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.383959 0.302518 0 0 0

CAGE analysis