Hb_011349_010

Information

Type -
Description -
Location Contig11349: 5521-6093
Sequence    

Annotation

kegg
ID rcu:RCOM_0393610
description hypothetical protein
nr
ID XP_012092467.1
description PREDICTED: MLP-like protein 423 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21786 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011349_010 0.0 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
2 Hb_156554_010 0.1706533167 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
3 Hb_000123_200 0.2377789864 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
4 Hb_160366_010 0.2443418085 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
5 Hb_007416_040 0.2509860847 - - glutamate receptor 2 plant, putative [Ricinus communis]
6 Hb_004324_170 0.2832788369 - - -
7 Hb_007545_040 0.283438864 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
8 Hb_162189_010 0.2836997739 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
9 Hb_002099_010 0.2859804052 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
10 Hb_156850_010 0.2873599277 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
11 Hb_001247_340 0.2964441629 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
12 Hb_132840_040 0.3074386981 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
13 Hb_000093_070 0.3110963237 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
14 Hb_087999_010 0.3113769387 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
15 Hb_004491_020 0.3210225386 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
16 Hb_000264_150 0.325150509 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
17 Hb_141408_010 0.3301079859 - - PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
18 Hb_009078_040 0.3331324145 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
19 Hb_001529_070 0.3393396952 transcription factor TF Family: AP2 hypothetical protein POPTR_0018s09900g [Populus trichocarpa]
20 Hb_001722_090 0.3402672752 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]

Gene co-expression network

sample Hb_011349_010 Hb_011349_010 Hb_156554_010 Hb_156554_010 Hb_011349_010--Hb_156554_010 Hb_000123_200 Hb_000123_200 Hb_011349_010--Hb_000123_200 Hb_160366_010 Hb_160366_010 Hb_011349_010--Hb_160366_010 Hb_007416_040 Hb_007416_040 Hb_011349_010--Hb_007416_040 Hb_004324_170 Hb_004324_170 Hb_011349_010--Hb_004324_170 Hb_007545_040 Hb_007545_040 Hb_011349_010--Hb_007545_040 Hb_156554_010--Hb_000123_200 Hb_156554_010--Hb_160366_010 Hb_002099_010 Hb_002099_010 Hb_156554_010--Hb_002099_010 Hb_156554_010--Hb_007416_040 Hb_000613_150 Hb_000613_150 Hb_156554_010--Hb_000613_150 Hb_000123_200--Hb_160366_010 Hb_000123_200--Hb_002099_010 Hb_000123_200--Hb_007416_040 Hb_000175_580 Hb_000175_580 Hb_000123_200--Hb_000175_580 Hb_160366_010--Hb_002099_010 Hb_160366_010--Hb_007416_040 Hb_160366_010--Hb_000175_580 Hb_000094_260 Hb_000094_260 Hb_007416_040--Hb_000094_260 Hb_002272_190 Hb_002272_190 Hb_007416_040--Hb_002272_190 Hb_001865_110 Hb_001865_110 Hb_007416_040--Hb_001865_110 Hb_004324_170--Hb_007545_040 Hb_162189_010 Hb_162189_010 Hb_004324_170--Hb_162189_010 Hb_156850_010 Hb_156850_010 Hb_004324_170--Hb_156850_010 Hb_001247_340 Hb_001247_340 Hb_004324_170--Hb_001247_340 Hb_132840_040 Hb_132840_040 Hb_004324_170--Hb_132840_040 Hb_000093_070 Hb_000093_070 Hb_004324_170--Hb_000093_070 Hb_007545_040--Hb_162189_010 Hb_007545_040--Hb_156850_010 Hb_007545_040--Hb_001247_340 Hb_007545_040--Hb_132840_040 Hb_007545_040--Hb_000093_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.80588 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.24047 0.365394 0 0 0

CAGE analysis