Hb_162189_010

Information

Type -
Description -
Location Contig162189: 163-648
Sequence    

Annotation

kegg
ID rcu:RCOM_0574900
description receptor serine/threonine kinase, putative
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q9FID5
description Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1
trembl
ID B9SUU3
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_0574900 PE=4 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_162189_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_007545_040 0.0059854325 - - PREDICTED: uncharacterized protein LOC104884077 [Beta vulgaris subsp. vulgaris]
3 Hb_004324_170 0.0131521291 - - -
4 Hb_156850_010 0.0668915233 - - PREDICTED: uncharacterized protein LOC105635403 [Jatropha curcas]
5 Hb_001247_340 0.0748460483 transcription factor TF Family: M-type mads box protein, putative [Ricinus communis]
6 Hb_132840_040 0.140879367 - - 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis]
7 Hb_004491_020 0.1413437679 - - PREDICTED: putative inactive cadmium/zinc-transporting ATPase HMA3 [Jatropha curcas]
8 Hb_000264_150 0.1503120586 - - PREDICTED: uncharacterized protein LOC103870759 [Brassica rapa]
9 Hb_000093_070 0.1503390157 transcription factor TF Family: C2C2-YABBY Protein CRABS CLAW, putative [Ricinus communis]
10 Hb_087999_010 0.151041413 - - PREDICTED: uncharacterized protein LOC105640118 [Jatropha curcas]
11 Hb_001722_090 0.1804830573 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
12 Hb_001709_100 0.1813277234 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
13 Hb_009078_040 0.1986954884 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
14 Hb_011349_010 0.2836997739 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
15 Hb_022680_020 0.2858778381 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
16 Hb_015183_040 0.3149398947 - - -
17 Hb_009083_040 0.3181319384 - - hypothetical protein JCGZ_12563 [Jatropha curcas]
18 Hb_001205_010 0.3645943128 - - -
19 Hb_000313_020 0.3703181289 - - Endoplasmic reticulum vesicle transporter protein isoform 2, partial [Theobroma cacao]
20 Hb_008725_160 0.3768048624 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_162189_010 Hb_162189_010 Hb_007545_040 Hb_007545_040 Hb_162189_010--Hb_007545_040 Hb_004324_170 Hb_004324_170 Hb_162189_010--Hb_004324_170 Hb_156850_010 Hb_156850_010 Hb_162189_010--Hb_156850_010 Hb_001247_340 Hb_001247_340 Hb_162189_010--Hb_001247_340 Hb_132840_040 Hb_132840_040 Hb_162189_010--Hb_132840_040 Hb_004491_020 Hb_004491_020 Hb_162189_010--Hb_004491_020 Hb_007545_040--Hb_004324_170 Hb_007545_040--Hb_156850_010 Hb_007545_040--Hb_001247_340 Hb_007545_040--Hb_132840_040 Hb_000093_070 Hb_000093_070 Hb_007545_040--Hb_000093_070 Hb_004324_170--Hb_156850_010 Hb_004324_170--Hb_001247_340 Hb_004324_170--Hb_132840_040 Hb_004324_170--Hb_000093_070 Hb_156850_010--Hb_132840_040 Hb_156850_010--Hb_000093_070 Hb_087999_010 Hb_087999_010 Hb_156850_010--Hb_087999_010 Hb_001247_340--Hb_004491_020 Hb_000264_150 Hb_000264_150 Hb_001247_340--Hb_000264_150 Hb_001722_090 Hb_001722_090 Hb_001247_340--Hb_001722_090 Hb_132840_040--Hb_000093_070 Hb_132840_040--Hb_087999_010 Hb_009078_040 Hb_009078_040 Hb_132840_040--Hb_009078_040 Hb_004491_020--Hb_000264_150 Hb_004491_020--Hb_001722_090 Hb_001709_100 Hb_001709_100 Hb_004491_020--Hb_001709_100 Hb_004491_020--Hb_007545_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0989087 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.140679 0 0 0 0

CAGE analysis