Hb_000613_150

Information

Type -
Description -
Location Contig613: 113956-118843
Sequence    

Annotation

kegg
ID rcu:RCOM_0691130
description hypothetical protein
nr
ID XP_012081507.1
description PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1E2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18521 PE=4 SV=1
Gene Ontology
ID GO:0003824
description rubisco methyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000613_150 0.0 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
2 Hb_000317_530 0.182225869 - - hypothetical protein, partial [Pseudomonas fluorescens]
3 Hb_012163_030 0.1857739252 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
4 Hb_001632_030 0.2326599521 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
5 Hb_000402_110 0.250901828 - - hypothetical protein JCGZ_17786 [Jatropha curcas]
6 Hb_003124_180 0.2654458821 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_026740_010 0.2913383538 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
8 Hb_000062_410 0.2935826098 - - PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
9 Hb_010422_080 0.3027238437 - - -
10 Hb_002282_040 0.3140469101 - - hypothetical protein VITISV_030841 [Vitis vinifera]
11 Hb_156554_010 0.3253401246 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
12 Hb_004931_010 0.3264398433 - - inosine triphosphate pyrophosphatase, putative [Ricinus communis]
13 Hb_156850_060 0.3270083019 - - PREDICTED: uncharacterized protein LOC105635248 [Jatropha curcas]
14 Hb_000123_200 0.3290870211 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
15 Hb_160366_010 0.3322964362 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
16 Hb_002099_010 0.3366442362 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
17 Hb_001348_200 0.3419736679 - - -
18 Hb_006588_010 0.3450305651 - - -
19 Hb_000890_090 0.3515291403 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
20 Hb_012368_070 0.3594453016 - - RNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000613_150 Hb_000613_150 Hb_000317_530 Hb_000317_530 Hb_000613_150--Hb_000317_530 Hb_012163_030 Hb_012163_030 Hb_000613_150--Hb_012163_030 Hb_001632_030 Hb_001632_030 Hb_000613_150--Hb_001632_030 Hb_000402_110 Hb_000402_110 Hb_000613_150--Hb_000402_110 Hb_003124_180 Hb_003124_180 Hb_000613_150--Hb_003124_180 Hb_026740_010 Hb_026740_010 Hb_000613_150--Hb_026740_010 Hb_000062_410 Hb_000062_410 Hb_000317_530--Hb_000062_410 Hb_010422_080 Hb_010422_080 Hb_000317_530--Hb_010422_080 Hb_000317_530--Hb_012163_030 Hb_000031_040 Hb_000031_040 Hb_000317_530--Hb_000031_040 Hb_000487_280 Hb_000487_280 Hb_000317_530--Hb_000487_280 Hb_008954_010 Hb_008954_010 Hb_012163_030--Hb_008954_010 Hb_006588_010 Hb_006588_010 Hb_012163_030--Hb_006588_010 Hb_001348_110 Hb_001348_110 Hb_012163_030--Hb_001348_110 Hb_000804_030 Hb_000804_030 Hb_012163_030--Hb_000804_030 Hb_001632_030--Hb_012163_030 Hb_185224_010 Hb_185224_010 Hb_001632_030--Hb_185224_010 Hb_001632_030--Hb_003124_180 Hb_001632_030--Hb_026740_010 Hb_001632_030--Hb_000317_530 Hb_000402_110--Hb_003124_180 Hb_000402_110--Hb_000317_530 Hb_002282_040 Hb_002282_040 Hb_000402_110--Hb_002282_040 Hb_003095_090 Hb_003095_090 Hb_000402_110--Hb_003095_090 Hb_003626_010 Hb_003626_010 Hb_000402_110--Hb_003626_010 Hb_002701_190 Hb_002701_190 Hb_003124_180--Hb_002701_190 Hb_000890_090 Hb_000890_090 Hb_003124_180--Hb_000890_090 Hb_006655_040 Hb_006655_040 Hb_003124_180--Hb_006655_040 Hb_026740_010--Hb_000890_090 Hb_026740_010--Hb_012163_030 Hb_001911_070 Hb_001911_070 Hb_026740_010--Hb_001911_070 Hb_044555_010 Hb_044555_010 Hb_026740_010--Hb_044555_010 Hb_026740_010--Hb_000317_530
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0400625 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0393921 0.061974 0 0.0248149 0

CAGE analysis