Hb_012163_030

Information

Type -
Description -
Location Contig12163: 25459-30764
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022115mg
description hypothetical protein
nr
ID XP_012089475.1
description PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
swissprot
ID P14381
description Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1
trembl
ID M5VU98
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022115mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012163_030 0.0 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
2 Hb_000613_150 0.1857739252 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
3 Hb_000317_530 0.2038645322 - - hypothetical protein, partial [Pseudomonas fluorescens]
4 Hb_008954_010 0.2297199354 - - -
5 Hb_006588_010 0.2326907854 - - -
6 Hb_001348_110 0.2349519161 - - PREDICTED: esterase-like [Jatropha curcas]
7 Hb_000804_030 0.2435180242 - - Protein C14orf111, putative [Ricinus communis]
8 Hb_001348_200 0.2584771206 - - -
9 Hb_003124_140 0.2637161296 - - hypothetical protein Csa_4G182240 [Cucumis sativus]
10 Hb_026740_010 0.2642740564 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
11 Hb_160366_010 0.2653223903 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
12 Hb_000123_200 0.2670070862 - - PREDICTED: WAT1-related protein At2g39510 [Jatropha curcas]
13 Hb_000062_410 0.2674066453 - - PREDICTED: uncharacterized protein LOC105644766 [Jatropha curcas]
14 Hb_001520_020 0.2705002726 - - PREDICTED: metal tolerance protein C2 [Jatropha curcas]
15 Hb_001632_030 0.2708050751 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
16 Hb_000011_340 0.2708975371 - - PREDICTED: protein LURP-one-related 11-like [Jatropha curcas]
17 Hb_010422_080 0.2710805194 - - -
18 Hb_001186_080 0.2766063152 - - PREDICTED: F-box protein FBW2-like [Nelumbo nucifera]
19 Hb_001140_240 0.2978452282 - - metal ion binding protein, putative [Ricinus communis]
20 Hb_002099_010 0.3054278671 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]

Gene co-expression network

sample Hb_012163_030 Hb_012163_030 Hb_000613_150 Hb_000613_150 Hb_012163_030--Hb_000613_150 Hb_000317_530 Hb_000317_530 Hb_012163_030--Hb_000317_530 Hb_008954_010 Hb_008954_010 Hb_012163_030--Hb_008954_010 Hb_006588_010 Hb_006588_010 Hb_012163_030--Hb_006588_010 Hb_001348_110 Hb_001348_110 Hb_012163_030--Hb_001348_110 Hb_000804_030 Hb_000804_030 Hb_012163_030--Hb_000804_030 Hb_000613_150--Hb_000317_530 Hb_001632_030 Hb_001632_030 Hb_000613_150--Hb_001632_030 Hb_000402_110 Hb_000402_110 Hb_000613_150--Hb_000402_110 Hb_003124_180 Hb_003124_180 Hb_000613_150--Hb_003124_180 Hb_026740_010 Hb_026740_010 Hb_000613_150--Hb_026740_010 Hb_000062_410 Hb_000062_410 Hb_000317_530--Hb_000062_410 Hb_010422_080 Hb_010422_080 Hb_000317_530--Hb_010422_080 Hb_000031_040 Hb_000031_040 Hb_000317_530--Hb_000031_040 Hb_000487_280 Hb_000487_280 Hb_000317_530--Hb_000487_280 Hb_008954_010--Hb_001348_110 Hb_008954_010--Hb_000804_030 Hb_001520_020 Hb_001520_020 Hb_008954_010--Hb_001520_020 Hb_000011_340 Hb_000011_340 Hb_008954_010--Hb_000011_340 Hb_001140_240 Hb_001140_240 Hb_008954_010--Hb_001140_240 Hb_005725_110 Hb_005725_110 Hb_008954_010--Hb_005725_110 Hb_002615_100 Hb_002615_100 Hb_006588_010--Hb_002615_100 Hb_001427_140 Hb_001427_140 Hb_006588_010--Hb_001427_140 Hb_006922_040 Hb_006922_040 Hb_006588_010--Hb_006922_040 Hb_002228_090 Hb_002228_090 Hb_006588_010--Hb_002228_090 Hb_001186_080 Hb_001186_080 Hb_006588_010--Hb_001186_080 Hb_001348_110--Hb_000804_030 Hb_001348_110--Hb_001520_020 Hb_001348_110--Hb_000011_340 Hb_075060_030 Hb_075060_030 Hb_001348_110--Hb_075060_030 Hb_000270_800 Hb_000270_800 Hb_001348_110--Hb_000270_800 Hb_002903_010 Hb_002903_010 Hb_000804_030--Hb_002903_010 Hb_031284_050 Hb_031284_050 Hb_000804_030--Hb_031284_050 Hb_034587_030 Hb_034587_030 Hb_000804_030--Hb_034587_030 Hb_018609_040 Hb_018609_040 Hb_000804_030--Hb_018609_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00312029 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0095628 0.0150515 0 0.00297933 0

CAGE analysis