Hb_026740_010

Information

Type -
Description -
Location Contig26740: 1894-3656
Sequence    

Annotation

kegg
ID dosa:Os08t0513000-01
description Os08g0513000; Similar to Serine/threonine protein phosphatase.
nr
ID XP_012087578.1
description PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
swissprot
ID Q9FN02
description Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1
trembl
ID A0A0E0LWU0
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID GO:0009536
description serine threonine-protein phosphatase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_026740_010 0.0 - - PREDICTED: serine/threonine-protein phosphatase 7 [Jatropha curcas]
2 Hb_000890_090 0.2092762263 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
3 Hb_012163_030 0.2642740564 - - PREDICTED: uncharacterized protein LOC105647861 [Jatropha curcas]
4 Hb_001911_070 0.2673417227 - - -
5 Hb_044555_010 0.2704941148 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
6 Hb_001632_030 0.2758063118 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
7 Hb_000317_530 0.2786854528 - - hypothetical protein, partial [Pseudomonas fluorescens]
8 Hb_000613_150 0.2913383538 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
9 Hb_003398_020 0.2931173343 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
10 Hb_004097_040 0.2937567732 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
11 Hb_008215_030 0.2955364979 - - hypothetical protein 3 [Hevea brasiliensis]
12 Hb_002260_160 0.2993139508 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002259_140 0.3010777748 - - -
14 Hb_006120_090 0.3037716573 - - PREDICTED: desiccation-related protein PCC13-62-like [Jatropha curcas]
15 Hb_021906_010 0.3047916265 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]
16 Hb_000239_110 0.3097638442 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
17 Hb_010422_080 0.310316293 - - -
18 Hb_000025_440 0.3146594054 - - PREDICTED: ankyrin repeat-containing protein P16F5.05c-like [Populus euphratica]
19 Hb_000205_200 0.3149581693 - - -
20 Hb_004128_040 0.3160902582 - - -

Gene co-expression network

sample Hb_026740_010 Hb_026740_010 Hb_000890_090 Hb_000890_090 Hb_026740_010--Hb_000890_090 Hb_012163_030 Hb_012163_030 Hb_026740_010--Hb_012163_030 Hb_001911_070 Hb_001911_070 Hb_026740_010--Hb_001911_070 Hb_044555_010 Hb_044555_010 Hb_026740_010--Hb_044555_010 Hb_001632_030 Hb_001632_030 Hb_026740_010--Hb_001632_030 Hb_000317_530 Hb_000317_530 Hb_026740_010--Hb_000317_530 Hb_000172_160 Hb_000172_160 Hb_000890_090--Hb_000172_160 Hb_000890_090--Hb_044555_010 Hb_000599_310 Hb_000599_310 Hb_000890_090--Hb_000599_310 Hb_001828_030 Hb_001828_030 Hb_000890_090--Hb_001828_030 Hb_003124_180 Hb_003124_180 Hb_000890_090--Hb_003124_180 Hb_000613_150 Hb_000613_150 Hb_012163_030--Hb_000613_150 Hb_012163_030--Hb_000317_530 Hb_008954_010 Hb_008954_010 Hb_012163_030--Hb_008954_010 Hb_006588_010 Hb_006588_010 Hb_012163_030--Hb_006588_010 Hb_001348_110 Hb_001348_110 Hb_012163_030--Hb_001348_110 Hb_000804_030 Hb_000804_030 Hb_012163_030--Hb_000804_030 Hb_001817_140 Hb_001817_140 Hb_001911_070--Hb_001817_140 Hb_002259_140 Hb_002259_140 Hb_001911_070--Hb_002259_140 Hb_001623_070 Hb_001623_070 Hb_001911_070--Hb_001623_070 Hb_003120_100 Hb_003120_100 Hb_001911_070--Hb_003120_100 Hb_021906_010 Hb_021906_010 Hb_001911_070--Hb_021906_010 Hb_000025_440 Hb_000025_440 Hb_001911_070--Hb_000025_440 Hb_004097_040 Hb_004097_040 Hb_044555_010--Hb_004097_040 Hb_004200_030 Hb_004200_030 Hb_044555_010--Hb_004200_030 Hb_002081_170 Hb_002081_170 Hb_044555_010--Hb_002081_170 Hb_007386_010 Hb_007386_010 Hb_044555_010--Hb_007386_010 Hb_001979_030 Hb_001979_030 Hb_044555_010--Hb_001979_030 Hb_000136_160 Hb_000136_160 Hb_044555_010--Hb_000136_160 Hb_001632_030--Hb_000613_150 Hb_001632_030--Hb_012163_030 Hb_185224_010 Hb_185224_010 Hb_001632_030--Hb_185224_010 Hb_001632_030--Hb_003124_180 Hb_001632_030--Hb_000317_530 Hb_000062_410 Hb_000062_410 Hb_000317_530--Hb_000062_410 Hb_000317_530--Hb_000613_150 Hb_010422_080 Hb_010422_080 Hb_000317_530--Hb_010422_080 Hb_000031_040 Hb_000031_040 Hb_000317_530--Hb_000031_040 Hb_000487_280 Hb_000487_280 Hb_000317_530--Hb_000487_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0336888 0.0444903 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0966608 0.151943 0 0.0622047 0

CAGE analysis