Hb_003120_100

Information

Type -
Description -
Location Contig3120: 52141-54792
Sequence    

Annotation

kegg
ID tcc:TCM_034267
description JHL20J20.8 protein
nr
ID XP_012073753.1
description PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
swissprot
ID Q94CH6
description GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1
trembl
ID A0A067KKW6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08182 PE=4 SV=1
Gene Ontology
ID GO:0016298
description gdsl esterase lipase exl3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003120_100 0.0 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
2 Hb_101319_020 0.2127892277 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
3 Hb_004200_030 0.2312990223 - - PREDICTED: SWR1 complex subunit 6-like isoform X1 [Citrus sinensis]
4 Hb_002259_140 0.2399083232 - - -
5 Hb_007386_010 0.2438518036 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
6 Hb_001911_070 0.2495400967 - - -
7 Hb_003178_020 0.2537067748 transcription factor TF Family: B3 conserved hypothetical protein [Ricinus communis]
8 Hb_021906_010 0.2659382765 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]
9 Hb_033594_070 0.270532089 - - PREDICTED: uncharacterized protein LOC105787685 isoform X1 [Gossypium raimondii]
10 Hb_002631_300 0.282842725 - - PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas]
11 Hb_000175_190 0.285473101 - - PREDICTED: phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Jatropha curcas]
12 Hb_002099_010 0.2892713031 - - cysteine proteinase inhibitor 5-like [Cucumis sativus]
13 Hb_000173_050 0.2966800175 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
14 Hb_000155_090 0.2982600617 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
15 Hb_005144_070 0.3081974795 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002874_020 0.3082684417 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105637459 isoform X1 [Jatropha curcas]
17 Hb_002311_300 0.3084621734 - - PREDICTED: J protein JJJ2 [Jatropha curcas]
18 Hb_002081_170 0.3085206817 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
19 Hb_100743_010 0.3100056557 - - hypothetical protein JCGZ_17104 [Jatropha curcas]
20 Hb_000109_230 0.3137136777 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_003120_100 Hb_003120_100 Hb_101319_020 Hb_101319_020 Hb_003120_100--Hb_101319_020 Hb_004200_030 Hb_004200_030 Hb_003120_100--Hb_004200_030 Hb_002259_140 Hb_002259_140 Hb_003120_100--Hb_002259_140 Hb_007386_010 Hb_007386_010 Hb_003120_100--Hb_007386_010 Hb_001911_070 Hb_001911_070 Hb_003120_100--Hb_001911_070 Hb_003178_020 Hb_003178_020 Hb_003120_100--Hb_003178_020 Hb_101319_020--Hb_004200_030 Hb_101319_020--Hb_007386_010 Hb_003602_010 Hb_003602_010 Hb_101319_020--Hb_003602_010 Hb_168326_010 Hb_168326_010 Hb_101319_020--Hb_168326_010 Hb_002874_020 Hb_002874_020 Hb_101319_020--Hb_002874_020 Hb_004200_030--Hb_007386_010 Hb_004200_030--Hb_002259_140 Hb_021906_010 Hb_021906_010 Hb_004200_030--Hb_021906_010 Hb_004097_040 Hb_004097_040 Hb_004200_030--Hb_004097_040 Hb_044555_010 Hb_044555_010 Hb_004200_030--Hb_044555_010 Hb_002081_170 Hb_002081_170 Hb_004200_030--Hb_002081_170 Hb_002259_140--Hb_021906_010 Hb_002259_140--Hb_007386_010 Hb_002259_140--Hb_004097_040 Hb_002259_140--Hb_001911_070 Hb_004241_010 Hb_004241_010 Hb_002259_140--Hb_004241_010 Hb_007386_010--Hb_021906_010 Hb_002099_010 Hb_002099_010 Hb_007386_010--Hb_002099_010 Hb_007386_010--Hb_004097_040 Hb_007386_010--Hb_044555_010 Hb_001817_140 Hb_001817_140 Hb_001911_070--Hb_001817_140 Hb_001623_070 Hb_001623_070 Hb_001911_070--Hb_001623_070 Hb_001911_070--Hb_021906_010 Hb_000025_440 Hb_000025_440 Hb_001911_070--Hb_000025_440 Hb_006970_140 Hb_006970_140 Hb_003178_020--Hb_006970_140 Hb_002631_300 Hb_002631_300 Hb_003178_020--Hb_002631_300 Hb_001767_060 Hb_001767_060 Hb_003178_020--Hb_001767_060 Hb_000173_050 Hb_000173_050 Hb_003178_020--Hb_000173_050 Hb_106552_070 Hb_106552_070 Hb_003178_020--Hb_106552_070 Hb_004449_040 Hb_004449_040 Hb_003178_020--Hb_004449_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0266049 0 0.488046 0.471594 0 0.0232835
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.487339 0.689943 0 0 0.0785878

CAGE analysis