Hb_106552_070

Information

Type -
Description -
Location Contig106552: 15063-17108
Sequence    

Annotation

kegg
ID rcu:RCOM_0820260
description hypothetical protein
nr
ID XP_002525216.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9ZUT3
description Protein ALUMINUM SENSITIVE 3 OS=Arabidopsis thaliana GN=ALS3 PE=1 SV=1
trembl
ID B9SGU7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0820260 PE=4 SV=1
Gene Ontology
ID GO:0010044
description protein aluminum sensitive 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_106552_070 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_011457_030 0.1676809999 - - type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis]
3 Hb_089140_090 0.1850191493 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X3 [Beta vulgaris subsp. vulgaris]
4 Hb_014508_010 0.1914005874 - - PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
5 Hb_003178_020 0.1918578319 transcription factor TF Family: B3 conserved hypothetical protein [Ricinus communis]
6 Hb_133799_010 0.1980501032 - - conserved hypothetical protein [Ricinus communis]
7 Hb_052764_070 0.2034047501 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
8 Hb_001975_130 0.2038033795 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 6 isoform X1 [Populus euphratica]
9 Hb_000152_210 0.2055387208 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002027_440 0.2115157499 - - conserved hypothetical protein [Ricinus communis]
11 Hb_011242_050 0.2189454991 - - PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa [Jatropha curcas]
12 Hb_002045_190 0.2190381723 - - PREDICTED: histone H2A variant 1 [Jatropha curcas]
13 Hb_000352_200 0.2225188685 - - PREDICTED: OTU domain-containing protein DDB_G0284757 isoform X1 [Jatropha curcas]
14 Hb_000740_150 0.2261563644 - - PREDICTED: uncharacterized protein LOC105629998 [Jatropha curcas]
15 Hb_001767_060 0.2317462694 - - PREDICTED: sulfate transporter 4.1, chloroplastic-like isoform X1 [Jatropha curcas]
16 Hb_006570_040 0.2327013786 - - hypothetical protein CICLE_v10002683mg [Citrus clementina]
17 Hb_004449_040 0.2352858698 - - PREDICTED: uncharacterized protein C630.12 [Jatropha curcas]
18 Hb_001450_030 0.2368841379 - - PREDICTED: uncharacterized protein LOC105650827 [Jatropha curcas]
19 Hb_015807_160 0.2396340381 - - PREDICTED: probable histone H2A.1 [Jatropha curcas]
20 Hb_001114_170 0.2408064392 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_106552_070 Hb_106552_070 Hb_011457_030 Hb_011457_030 Hb_106552_070--Hb_011457_030 Hb_089140_090 Hb_089140_090 Hb_106552_070--Hb_089140_090 Hb_014508_010 Hb_014508_010 Hb_106552_070--Hb_014508_010 Hb_003178_020 Hb_003178_020 Hb_106552_070--Hb_003178_020 Hb_133799_010 Hb_133799_010 Hb_106552_070--Hb_133799_010 Hb_052764_070 Hb_052764_070 Hb_106552_070--Hb_052764_070 Hb_001975_130 Hb_001975_130 Hb_011457_030--Hb_001975_130 Hb_003540_020 Hb_003540_020 Hb_011457_030--Hb_003540_020 Hb_107429_010 Hb_107429_010 Hb_011457_030--Hb_107429_010 Hb_000128_030 Hb_000128_030 Hb_011457_030--Hb_000128_030 Hb_000732_110 Hb_000732_110 Hb_011457_030--Hb_000732_110 Hb_001114_170 Hb_001114_170 Hb_089140_090--Hb_001114_170 Hb_033594_040 Hb_033594_040 Hb_089140_090--Hb_033594_040 Hb_002027_440 Hb_002027_440 Hb_089140_090--Hb_002027_440 Hb_000563_440 Hb_000563_440 Hb_089140_090--Hb_000563_440 Hb_015807_160 Hb_015807_160 Hb_089140_090--Hb_015807_160 Hb_002045_190 Hb_002045_190 Hb_089140_090--Hb_002045_190 Hb_000740_150 Hb_000740_150 Hb_014508_010--Hb_000740_150 Hb_029977_020 Hb_029977_020 Hb_014508_010--Hb_029977_020 Hb_004052_100 Hb_004052_100 Hb_014508_010--Hb_004052_100 Hb_001408_170 Hb_001408_170 Hb_014508_010--Hb_001408_170 Hb_014508_010--Hb_133799_010 Hb_001250_130 Hb_001250_130 Hb_014508_010--Hb_001250_130 Hb_006970_140 Hb_006970_140 Hb_003178_020--Hb_006970_140 Hb_002631_300 Hb_002631_300 Hb_003178_020--Hb_002631_300 Hb_001767_060 Hb_001767_060 Hb_003178_020--Hb_001767_060 Hb_000173_050 Hb_000173_050 Hb_003178_020--Hb_000173_050 Hb_004449_040 Hb_004449_040 Hb_003178_020--Hb_004449_040 Hb_133799_010--Hb_052764_070 Hb_133799_010--Hb_001767_060 Hb_154038_020 Hb_154038_020 Hb_133799_010--Hb_154038_020 Hb_001307_110 Hb_001307_110 Hb_133799_010--Hb_001307_110 Hb_033152_120 Hb_033152_120 Hb_133799_010--Hb_033152_120 Hb_052764_070--Hb_001767_060 Hb_052764_070--Hb_001307_110 Hb_052764_070--Hb_014508_010 Hb_093458_010 Hb_093458_010 Hb_052764_070--Hb_093458_010 Hb_052764_070--Hb_154038_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.054574 0.562597 6.27107 3.56533 0.0785748 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.564322 4.33896 0.268889 0.45817 1.69163

CAGE analysis