Hb_011457_030

Information

Type -
Description -
Location Contig11457: 17488-20488
Sequence    

Annotation

kegg
ID rcu:RCOM_0646340
description type I inositol polyphosphate 5-phosphatase, putative (EC:3.1.3.56)
nr
ID XP_002524747.1
description type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis]
swissprot
ID Q9LR47
description Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2
trembl
ID B9SFH8
description Type I inositol polyphosphate 5-phosphatase, putative OS=Ricinus communis GN=RCOM_0646340 PE=4 SV=1
Gene Ontology
ID GO:0004445
description type i inositol -trisphosphate 5-phosphatase cvp2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04391: 18883-19880
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011457_030 0.0 - - type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis]
2 Hb_106552_070 0.1676809999 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001975_130 0.2440542906 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 6 isoform X1 [Populus euphratica]
4 Hb_003540_020 0.246671954 - - conserved hypothetical protein [Ricinus communis]
5 Hb_107429_010 0.2644127483 - - PREDICTED: calcium-dependent protein kinase 34 [Jatropha curcas]
6 Hb_000128_030 0.2719681375 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000732_110 0.2745572939 - - hypothetical protein JCGZ_21339 [Jatropha curcas]
8 Hb_006570_040 0.2756916418 - - hypothetical protein CICLE_v10002683mg [Citrus clementina]
9 Hb_004163_020 0.2778292276 - - -
10 Hb_000152_210 0.2853110907 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000917_170 0.2860756751 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
12 Hb_000740_020 0.2903983573 transcription factor TF Family: MYB-related asymmetric leaves1 and rough sheath, putative [Ricinus communis]
13 Hb_002045_190 0.2915994513 - - PREDICTED: histone H2A variant 1 [Jatropha curcas]
14 Hb_000111_400 0.2936706348 - - hypothetical protein POPTR_0003s19310g [Populus trichocarpa]
15 Hb_000926_030 0.2937704067 - - zinc finger protein, putative [Ricinus communis]
16 Hb_003401_010 0.2948353535 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
17 Hb_089140_090 0.2975731829 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X3 [Beta vulgaris subsp. vulgaris]
18 Hb_011609_130 0.2994081416 - - -
19 Hb_007113_080 0.3010791953 - - PREDICTED: uncharacterized protein LOC105639553 isoform X1 [Jatropha curcas]
20 Hb_003178_020 0.3049539087 transcription factor TF Family: B3 conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011457_030 Hb_011457_030 Hb_106552_070 Hb_106552_070 Hb_011457_030--Hb_106552_070 Hb_001975_130 Hb_001975_130 Hb_011457_030--Hb_001975_130 Hb_003540_020 Hb_003540_020 Hb_011457_030--Hb_003540_020 Hb_107429_010 Hb_107429_010 Hb_011457_030--Hb_107429_010 Hb_000128_030 Hb_000128_030 Hb_011457_030--Hb_000128_030 Hb_000732_110 Hb_000732_110 Hb_011457_030--Hb_000732_110 Hb_089140_090 Hb_089140_090 Hb_106552_070--Hb_089140_090 Hb_014508_010 Hb_014508_010 Hb_106552_070--Hb_014508_010 Hb_003178_020 Hb_003178_020 Hb_106552_070--Hb_003178_020 Hb_133799_010 Hb_133799_010 Hb_106552_070--Hb_133799_010 Hb_052764_070 Hb_052764_070 Hb_106552_070--Hb_052764_070 Hb_033594_040 Hb_033594_040 Hb_001975_130--Hb_033594_040 Hb_002045_190 Hb_002045_190 Hb_001975_130--Hb_002045_190 Hb_089889_010 Hb_089889_010 Hb_001975_130--Hb_089889_010 Hb_001975_130--Hb_089140_090 Hb_001975_130--Hb_106552_070 Hb_003399_100 Hb_003399_100 Hb_001975_130--Hb_003399_100 Hb_000152_780 Hb_000152_780 Hb_003540_020--Hb_000152_780 Hb_000111_430 Hb_000111_430 Hb_003540_020--Hb_000111_430 Hb_024494_010 Hb_024494_010 Hb_003540_020--Hb_024494_010 Hb_006570_040 Hb_006570_040 Hb_003540_020--Hb_006570_040 Hb_000034_150 Hb_000034_150 Hb_003540_020--Hb_000034_150 Hb_008725_240 Hb_008725_240 Hb_003540_020--Hb_008725_240 Hb_000740_020 Hb_000740_020 Hb_107429_010--Hb_000740_020 Hb_001437_160 Hb_001437_160 Hb_107429_010--Hb_001437_160 Hb_000917_170 Hb_000917_170 Hb_107429_010--Hb_000917_170 Hb_001226_010 Hb_001226_010 Hb_107429_010--Hb_001226_010 Hb_004163_020 Hb_004163_020 Hb_107429_010--Hb_004163_020 Hb_000926_030 Hb_000926_030 Hb_000128_030--Hb_000926_030 Hb_000062_210 Hb_000062_210 Hb_000128_030--Hb_000062_210 Hb_030627_010 Hb_030627_010 Hb_000128_030--Hb_030627_010 Hb_000128_030--Hb_000732_110 Hb_004096_230 Hb_004096_230 Hb_000128_030--Hb_004096_230 Hb_000184_010 Hb_000184_010 Hb_000128_030--Hb_000184_010 Hb_011609_130 Hb_011609_130 Hb_000732_110--Hb_011609_130 Hb_002639_170 Hb_002639_170 Hb_000732_110--Hb_002639_170 Hb_000732_110--Hb_000926_030 Hb_001241_020 Hb_001241_020 Hb_000732_110--Hb_001241_020 Hb_000261_530 Hb_000261_530 Hb_000732_110--Hb_000261_530
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0738745 3.41762 1.1177 0.0220042 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0802058 2.22968 0.0397104 0.0251456 0.619322

CAGE analysis