Hb_024494_010

Information

Type -
Description -
Location Contig24494: 26-599
Sequence    

Annotation

kegg
ID cmo:103499816
description probable LRR receptor-like serine/threonine-protein kinase At4g36180
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID C0LGJ9
description Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0016301
description receptor protein kinase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_024494_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_007520_050 0.1312378996 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
3 Hb_001357_160 0.1324620928 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000107_580 0.1370275372 - - PREDICTED: delta(24)-sterol reductase [Jatropha curcas]
5 Hb_001386_060 0.1388039326 - - PREDICTED: acetolactate synthase 1, chloroplastic-like [Vitis vinifera]
6 Hb_001856_190 0.1407024498 - - SP1L, putative [Ricinus communis]
7 Hb_001439_050 0.1430863398 - - plastocyanin-like domain-containing family protein [Populus trichocarpa]
8 Hb_002066_100 0.14423913 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
9 Hb_074240_030 0.1444168648 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
10 Hb_001511_210 0.1449645229 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
11 Hb_008221_190 0.1453754603 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Jatropha curcas]
12 Hb_002243_030 0.1455014375 - - PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X1 [Jatropha curcas]
13 Hb_011671_050 0.1497102219 - - PREDICTED: F-box protein At5g07670 [Jatropha curcas]
14 Hb_000958_060 0.1510747838 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000010_320 0.1511869162 - - PREDICTED: protein STICHEL-like 2 [Jatropha curcas]
16 Hb_003101_020 0.1513657677 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
17 Hb_001258_130 0.1527425226 - - PREDICTED: kinesin-like protein KIF19 [Jatropha curcas]
18 Hb_108576_020 0.1539024104 - - conserved hypothetical protein [Ricinus communis]
19 Hb_023344_100 0.1553299662 - - PREDICTED: subtilisin-like protease SBT1.2 [Jatropha curcas]
20 Hb_000926_030 0.1553332134 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_024494_010 Hb_024494_010 Hb_007520_050 Hb_007520_050 Hb_024494_010--Hb_007520_050 Hb_001357_160 Hb_001357_160 Hb_024494_010--Hb_001357_160 Hb_000107_580 Hb_000107_580 Hb_024494_010--Hb_000107_580 Hb_001386_060 Hb_001386_060 Hb_024494_010--Hb_001386_060 Hb_001856_190 Hb_001856_190 Hb_024494_010--Hb_001856_190 Hb_001439_050 Hb_001439_050 Hb_024494_010--Hb_001439_050 Hb_174168_010 Hb_174168_010 Hb_007520_050--Hb_174168_010 Hb_003101_020 Hb_003101_020 Hb_007520_050--Hb_003101_020 Hb_007520_050--Hb_001439_050 Hb_062807_010 Hb_062807_010 Hb_007520_050--Hb_062807_010 Hb_001369_460 Hb_001369_460 Hb_007520_050--Hb_001369_460 Hb_005305_160 Hb_005305_160 Hb_007520_050--Hb_005305_160 Hb_002243_030 Hb_002243_030 Hb_001357_160--Hb_002243_030 Hb_074240_030 Hb_074240_030 Hb_001357_160--Hb_074240_030 Hb_015299_040 Hb_015299_040 Hb_001357_160--Hb_015299_040 Hb_158845_010 Hb_158845_010 Hb_001357_160--Hb_158845_010 Hb_001357_160--Hb_001856_190 Hb_000010_320 Hb_000010_320 Hb_001357_160--Hb_000010_320 Hb_003050_140 Hb_003050_140 Hb_000107_580--Hb_003050_140 Hb_000152_650 Hb_000152_650 Hb_000107_580--Hb_000152_650 Hb_001369_590 Hb_001369_590 Hb_000107_580--Hb_001369_590 Hb_105148_020 Hb_105148_020 Hb_000107_580--Hb_105148_020 Hb_000107_580--Hb_001357_160 Hb_000107_580--Hb_074240_030 Hb_001386_060--Hb_001856_190 Hb_003592_040 Hb_003592_040 Hb_001386_060--Hb_003592_040 Hb_003090_020 Hb_003090_020 Hb_001386_060--Hb_003090_020 Hb_001386_060--Hb_074240_030 Hb_001439_160 Hb_001439_160 Hb_001386_060--Hb_001439_160 Hb_001221_550 Hb_001221_550 Hb_001386_060--Hb_001221_550 Hb_001856_190--Hb_074240_030 Hb_001856_190--Hb_003090_020 Hb_001856_190--Hb_003592_040 Hb_001856_190--Hb_000010_320 Hb_001439_050--Hb_003101_020 Hb_001439_050--Hb_062807_010 Hb_108576_020 Hb_108576_020 Hb_001439_050--Hb_108576_020 Hb_002518_040 Hb_002518_040 Hb_001439_050--Hb_002518_040 Hb_007313_030 Hb_007313_030 Hb_001439_050--Hb_007313_030 Hb_011671_050 Hb_011671_050 Hb_001439_050--Hb_011671_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0521308 1.97192 0.687136 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.111664 0 0.0931567 0.62129

CAGE analysis