Hb_000261_530

Information

Type -
Description -
Location Contig261: 523704-528790
Sequence    

Annotation

kegg
ID mus:103994982
description beta-glucosidase 18-like isoform X1
nr
ID XP_012071272.1
description PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
swissprot
ID Q7XSK0
description Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=3 SV=2
trembl
ID A0A067L5J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01141 PE=3 SV=1
Gene Ontology
ID GO:0016787
description glycosyl hydrolase family 1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000261_530 0.0 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
2 Hb_002639_170 0.1746347053 - - carboxy-lyase, putative [Ricinus communis]
3 Hb_010288_050 0.1905827106 - - PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
4 Hb_006788_090 0.2065109833 - - -
5 Hb_005162_120 0.2073864982 - - ferric reductase oxidase [Manihot esculenta]
6 Hb_011609_130 0.2111605359 - - -
7 Hb_002799_120 0.2149927521 - - PREDICTED: uncharacterized protein LOC105141197 [Populus euphratica]
8 Hb_002693_040 0.2177490029 - - hypersensitive-induced response protein [Carica papaya]
9 Hb_000637_080 0.2231597087 - - PREDICTED: protein YLS3 [Jatropha curcas]
10 Hb_000732_110 0.225370487 - - hypothetical protein JCGZ_21339 [Jatropha curcas]
11 Hb_007225_010 0.2314959979 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Populus euphratica]
12 Hb_007317_100 0.2404064163 - - Peflin, putative [Ricinus communis]
13 Hb_001241_020 0.2413704056 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
14 Hb_000500_330 0.2422568188 - - PREDICTED: bidirectional sugar transporter SWEET2a-like [Jatropha curcas]
15 Hb_000668_100 0.2424140447 - - PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Jatropha curcas]
16 Hb_005839_080 0.2462969404 - - Transcription factor bHLH61 isoform 1 [Theobroma cacao]
17 Hb_003992_160 0.2463382491 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
18 Hb_008059_040 0.2490484 - - hypothetical protein POPTR_0019s12360g [Populus trichocarpa]
19 Hb_000483_270 0.2504946799 - - PREDICTED: uncharacterized protein LOC105632352 [Jatropha curcas]
20 Hb_000152_580 0.2514748142 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]

Gene co-expression network

sample Hb_000261_530 Hb_000261_530 Hb_002639_170 Hb_002639_170 Hb_000261_530--Hb_002639_170 Hb_010288_050 Hb_010288_050 Hb_000261_530--Hb_010288_050 Hb_006788_090 Hb_006788_090 Hb_000261_530--Hb_006788_090 Hb_005162_120 Hb_005162_120 Hb_000261_530--Hb_005162_120 Hb_011609_130 Hb_011609_130 Hb_000261_530--Hb_011609_130 Hb_002799_120 Hb_002799_120 Hb_000261_530--Hb_002799_120 Hb_002639_170--Hb_005162_120 Hb_002639_170--Hb_011609_130 Hb_002639_170--Hb_010288_050 Hb_001241_020 Hb_001241_020 Hb_002639_170--Hb_001241_020 Hb_007317_100 Hb_007317_100 Hb_002639_170--Hb_007317_100 Hb_002693_040 Hb_002693_040 Hb_010288_050--Hb_002693_040 Hb_007632_200 Hb_007632_200 Hb_010288_050--Hb_007632_200 Hb_000165_270 Hb_000165_270 Hb_010288_050--Hb_000165_270 Hb_010288_050--Hb_005162_120 Hb_008948_090 Hb_008948_090 Hb_010288_050--Hb_008948_090 Hb_006909_050 Hb_006909_050 Hb_010288_050--Hb_006909_050 Hb_004846_230 Hb_004846_230 Hb_006788_090--Hb_004846_230 Hb_001396_040 Hb_001396_040 Hb_006788_090--Hb_001396_040 Hb_000500_330 Hb_000500_330 Hb_006788_090--Hb_000500_330 Hb_002942_120 Hb_002942_120 Hb_006788_090--Hb_002942_120 Hb_000483_270 Hb_000483_270 Hb_006788_090--Hb_000483_270 Hb_000392_240 Hb_000392_240 Hb_006788_090--Hb_000392_240 Hb_000115_190 Hb_000115_190 Hb_005162_120--Hb_000115_190 Hb_000028_250 Hb_000028_250 Hb_005162_120--Hb_000028_250 Hb_002218_050 Hb_002218_050 Hb_005162_120--Hb_002218_050 Hb_007002_050 Hb_007002_050 Hb_005162_120--Hb_007002_050 Hb_005162_120--Hb_001241_020 Hb_011609_130--Hb_001241_020 Hb_000732_110 Hb_000732_110 Hb_011609_130--Hb_000732_110 Hb_011609_130--Hb_005162_120 Hb_000028_010 Hb_000028_010 Hb_011609_130--Hb_000028_010 Hb_011609_130--Hb_002799_120 Hb_002799_120--Hb_007317_100 Hb_006649_100 Hb_006649_100 Hb_002799_120--Hb_006649_100 Hb_000264_160 Hb_000264_160 Hb_002799_120--Hb_000264_160 Hb_000347_170 Hb_000347_170 Hb_002799_120--Hb_000347_170 Hb_005375_100 Hb_005375_100 Hb_002799_120--Hb_005375_100 Hb_000574_380 Hb_000574_380 Hb_002799_120--Hb_000574_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0408398 2.57439 0.0828487 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0311573 0.269635 0.0460572 0.146761 0.358997

CAGE analysis