Hb_001437_160

Information

Type -
Description -
Location Contig1437: 163626-165497
Sequence    

Annotation

kegg
ID rcu:RCOM_0472320
description nitrate transporter, putative
nr
ID XP_012064743.1
description PREDICTED: high-affinity nitrate transporter 2.1-like [Jatropha curcas]
swissprot
ID O82811
description High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana GN=NRT2.1 PE=1 SV=1
trembl
ID A0A067L9S3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05465 PE=4 SV=1
Gene Ontology
ID GO:0016021
description high-affinity nitrate transporter -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001437_160 0.0 - - PREDICTED: high-affinity nitrate transporter 2.1-like [Jatropha curcas]
2 Hb_000740_020 0.1306631021 transcription factor TF Family: MYB-related asymmetric leaves1 and rough sheath, putative [Ricinus communis]
3 Hb_107429_010 0.1477810223 - - PREDICTED: calcium-dependent protein kinase 34 [Jatropha curcas]
4 Hb_000836_150 0.2023204634 - - hypothetical protein POPTR_0003s13070g [Populus trichocarpa]
5 Hb_001226_010 0.2110097774 transcription factor TF Family: RWP-RK conserved hypothetical protein [Ricinus communis]
6 Hb_103739_010 0.2427725513 - - sodium/hydrogen exchanger, putative [Ricinus communis]
7 Hb_011344_060 0.2507683522 - - PREDICTED: uncharacterized protein LOC105645975 isoform X2 [Jatropha curcas]
8 Hb_067034_020 0.2810048773 - - PREDICTED: iridoid synthase [Jatropha curcas]
9 Hb_001439_090 0.2900645173 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001143_150 0.2973246356 - - PREDICTED: mitochondrial protein import protein MAS5-like [Populus euphratica]
11 Hb_034904_010 0.3107928465 - - PREDICTED: uncharacterized protein LOC105775231 [Gossypium raimondii]
12 Hb_000917_170 0.3116523777 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
13 Hb_002890_080 0.3162126778 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001322_030 0.3208206292 - - triacylglycerol lipase, putative [Ricinus communis]
15 Hb_007441_170 0.3284902603 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
16 Hb_000363_270 0.3386175595 - - hypothetical protein PRUPE_ppa024846mg [Prunus persica]
17 Hb_000155_090 0.3436314211 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
18 Hb_011457_030 0.3443184872 - - type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis]
19 Hb_008609_030 0.350192096 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_006746_010 0.3503692512 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_001437_160 Hb_001437_160 Hb_000740_020 Hb_000740_020 Hb_001437_160--Hb_000740_020 Hb_107429_010 Hb_107429_010 Hb_001437_160--Hb_107429_010 Hb_000836_150 Hb_000836_150 Hb_001437_160--Hb_000836_150 Hb_001226_010 Hb_001226_010 Hb_001437_160--Hb_001226_010 Hb_103739_010 Hb_103739_010 Hb_001437_160--Hb_103739_010 Hb_011344_060 Hb_011344_060 Hb_001437_160--Hb_011344_060 Hb_000740_020--Hb_107429_010 Hb_000740_020--Hb_001226_010 Hb_000740_020--Hb_000836_150 Hb_001143_150 Hb_001143_150 Hb_000740_020--Hb_001143_150 Hb_000917_170 Hb_000917_170 Hb_000740_020--Hb_000917_170 Hb_107429_010--Hb_000917_170 Hb_107429_010--Hb_001226_010 Hb_004163_020 Hb_004163_020 Hb_107429_010--Hb_004163_020 Hb_011457_030 Hb_011457_030 Hb_107429_010--Hb_011457_030 Hb_067034_020 Hb_067034_020 Hb_000836_150--Hb_067034_020 Hb_004728_030 Hb_004728_030 Hb_000836_150--Hb_004728_030 Hb_132840_120 Hb_132840_120 Hb_000836_150--Hb_132840_120 Hb_012092_070 Hb_012092_070 Hb_000836_150--Hb_012092_070 Hb_001322_030 Hb_001322_030 Hb_001226_010--Hb_001322_030 Hb_034904_010 Hb_034904_010 Hb_001226_010--Hb_034904_010 Hb_001226_010--Hb_103739_010 Hb_007145_010 Hb_007145_010 Hb_001226_010--Hb_007145_010 Hb_001401_100 Hb_001401_100 Hb_103739_010--Hb_001401_100 Hb_001439_090 Hb_001439_090 Hb_103739_010--Hb_001439_090 Hb_002890_080 Hb_002890_080 Hb_103739_010--Hb_002890_080 Hb_000152_310 Hb_000152_310 Hb_103739_010--Hb_000152_310 Hb_011344_060--Hb_107429_010 Hb_011344_060--Hb_000740_020 Hb_000363_270 Hb_000363_270 Hb_011344_060--Hb_000363_270 Hb_011344_060--Hb_001226_010 Hb_011344_060--Hb_000917_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.00952071 0.0100986 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0229326 0 0 0

CAGE analysis