Hb_000363_270

Information

Type -
Description -
Location Contig363: 209015-219200
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa024846mg
description hypothetical protein
nr
ID XP_007214261.1
description hypothetical protein PRUPE_ppa024846mg [Prunus persica]
swissprot
ID Q84WG1
description Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana GN=NHX3 PE=2 SV=2
trembl
ID M5X8S5
description Sodium/hydrogen exchanger OS=Prunus persica GN=PRUPE_ppa024846mg PE=3 SV=1
Gene Ontology
ID GO:0022857
description sodium hydrogen exchanger 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37305: 216844-217475
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_270 0.0 - - hypothetical protein PRUPE_ppa024846mg [Prunus persica]
2 Hb_001016_070 0.1747024798 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
3 Hb_001817_140 0.2167572333 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
4 Hb_186158_010 0.2634110689 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001623_070 0.2638303586 - - cytochrome B5 isoform 1, putative [Ricinus communis]
6 Hb_002259_140 0.2716529002 - - -
7 Hb_001911_070 0.2722897021 - - -
8 Hb_000975_270 0.2786412731 - - PREDICTED: histone H2B.11-like [Phoenix dactylifera]
9 Hb_002890_070 0.2828640643 - - ATP-dependent RNA helicase family protein [Populus trichocarpa]
10 Hb_011344_060 0.3021028685 - - PREDICTED: uncharacterized protein LOC105645975 isoform X2 [Jatropha curcas]
11 Hb_001348_200 0.3027431199 - - -
12 Hb_011224_040 0.3035853392 - - PREDICTED: ER membrane protein complex subunit 8/9 homolog [Jatropha curcas]
13 Hb_021906_010 0.3164959122 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]
14 Hb_024650_040 0.3233345217 - - PREDICTED: josephin-like protein [Jatropha curcas]
15 Hb_003376_380 0.3250024582 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
16 Hb_001439_090 0.3266371931 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002890_080 0.3286067035 - - conserved hypothetical protein [Ricinus communis]
18 Hb_117092_010 0.3286126583 - - acyl-CoA oxidase, putative [Ricinus communis]
19 Hb_003120_100 0.3290184923 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
20 Hb_007441_170 0.330355966 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_270 Hb_000363_270 Hb_001016_070 Hb_001016_070 Hb_000363_270--Hb_001016_070 Hb_001817_140 Hb_001817_140 Hb_000363_270--Hb_001817_140 Hb_186158_010 Hb_186158_010 Hb_000363_270--Hb_186158_010 Hb_001623_070 Hb_001623_070 Hb_000363_270--Hb_001623_070 Hb_002259_140 Hb_002259_140 Hb_000363_270--Hb_002259_140 Hb_001911_070 Hb_001911_070 Hb_000363_270--Hb_001911_070 Hb_001016_070--Hb_001817_140 Hb_001016_070--Hb_001623_070 Hb_011224_040 Hb_011224_040 Hb_001016_070--Hb_011224_040 Hb_000975_270 Hb_000975_270 Hb_001016_070--Hb_000975_270 Hb_001016_070--Hb_186158_010 Hb_001817_140--Hb_001911_070 Hb_001754_140 Hb_001754_140 Hb_001817_140--Hb_001754_140 Hb_001817_140--Hb_001623_070 Hb_001102_100 Hb_001102_100 Hb_001817_140--Hb_001102_100 Hb_186158_010--Hb_000975_270 Hb_000046_200 Hb_000046_200 Hb_186158_010--Hb_000046_200 Hb_032974_010 Hb_032974_010 Hb_186158_010--Hb_032974_010 Hb_186158_010--Hb_011224_040 Hb_182005_010 Hb_182005_010 Hb_186158_010--Hb_182005_010 Hb_005199_010 Hb_005199_010 Hb_186158_010--Hb_005199_010 Hb_002890_070 Hb_002890_070 Hb_001623_070--Hb_002890_070 Hb_003376_380 Hb_003376_380 Hb_001623_070--Hb_003376_380 Hb_003398_020 Hb_003398_020 Hb_001623_070--Hb_003398_020 Hb_001439_090 Hb_001439_090 Hb_001623_070--Hb_001439_090 Hb_011609_110 Hb_011609_110 Hb_001623_070--Hb_011609_110 Hb_042871_010 Hb_042871_010 Hb_001623_070--Hb_042871_010 Hb_021906_010 Hb_021906_010 Hb_002259_140--Hb_021906_010 Hb_004200_030 Hb_004200_030 Hb_002259_140--Hb_004200_030 Hb_007386_010 Hb_007386_010 Hb_002259_140--Hb_007386_010 Hb_004097_040 Hb_004097_040 Hb_002259_140--Hb_004097_040 Hb_002259_140--Hb_001911_070 Hb_004241_010 Hb_004241_010 Hb_002259_140--Hb_004241_010 Hb_001911_070--Hb_001623_070 Hb_003120_100 Hb_003120_100 Hb_001911_070--Hb_003120_100 Hb_001911_070--Hb_021906_010 Hb_000025_440 Hb_000025_440 Hb_001911_070--Hb_000025_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0346836 0.0347087 0 0.0158617
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0353841 0.194851 0 0 0

CAGE analysis