Hb_042871_010

Information

Type -
Description -
Location Contig42871: 423-1385
Sequence    

Annotation

kegg
ID rcu:RCOM_0554440
description acyl-CoA oxidase, putative (EC:1.9.3.1)
nr
ID XP_012079023.1
description PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
swissprot
ID P0CZ23
description Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=1
trembl
ID A0A067KHP0
description Acyl-coenzyme A oxidase OS=Jatropha curcas GN=JCGZ_12221 PE=3 SV=1
Gene Ontology
ID GO:0016627
description acyl-coenzyme a oxidase peroxisomal-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_042871_010 0.0 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
2 Hb_000656_410 0.1466217213 - - hypothetical protein POPTR_0003s06410g [Populus trichocarpa]
3 Hb_033834_050 0.1553090984 - - conserved hypothetical protein [Ricinus communis]
4 Hb_011609_110 0.1707153373 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
5 Hb_000062_300 0.1764188461 - - PREDICTED: uncharacterized protein LOC105644761 [Jatropha curcas]
6 Hb_000239_110 0.1880707806 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
7 Hb_014497_080 0.1928055895 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
8 Hb_006277_070 0.1935896698 - - conserved hypothetical protein [Ricinus communis]
9 Hb_011628_020 0.1968181444 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002784_100 0.201014002 - - PREDICTED: uncharacterized protein LOC105631246 [Jatropha curcas]
11 Hb_003732_040 0.2016418808 - - putative esterase family protein [Populus trichocarpa]
12 Hb_003398_020 0.2016480613 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
13 Hb_012573_010 0.2127939605 - - PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
14 Hb_005321_010 0.2177609456 - - PREDICTED: uncharacterized protein LOC105644542 [Jatropha curcas]
15 Hb_003891_080 0.2215785106 - - hypothetical protein JCGZ_16710 [Jatropha curcas]
16 Hb_001623_070 0.2224313067 - - cytochrome B5 isoform 1, putative [Ricinus communis]
17 Hb_001266_030 0.2253860564 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Jatropha curcas]
18 Hb_001449_100 0.2255377218 - - PREDICTED: transcription factor bHLH149 [Jatropha curcas]
19 Hb_005725_100 0.2320874 - - hypothetical protein 30 [Hevea brasiliensis]
20 Hb_086692_020 0.234712981 - - PREDICTED: protein kinase APK1B, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_042871_010 Hb_042871_010 Hb_000656_410 Hb_000656_410 Hb_042871_010--Hb_000656_410 Hb_033834_050 Hb_033834_050 Hb_042871_010--Hb_033834_050 Hb_011609_110 Hb_011609_110 Hb_042871_010--Hb_011609_110 Hb_000062_300 Hb_000062_300 Hb_042871_010--Hb_000062_300 Hb_000239_110 Hb_000239_110 Hb_042871_010--Hb_000239_110 Hb_014497_080 Hb_014497_080 Hb_042871_010--Hb_014497_080 Hb_000656_410--Hb_011609_110 Hb_002784_100 Hb_002784_100 Hb_000656_410--Hb_002784_100 Hb_000656_410--Hb_033834_050 Hb_003891_080 Hb_003891_080 Hb_000656_410--Hb_003891_080 Hb_005321_010 Hb_005321_010 Hb_000656_410--Hb_005321_010 Hb_033834_050--Hb_002784_100 Hb_033834_050--Hb_011609_110 Hb_028271_020 Hb_028271_020 Hb_033834_050--Hb_028271_020 Hb_001449_100 Hb_001449_100 Hb_033834_050--Hb_001449_100 Hb_033834_050--Hb_000062_300 Hb_011609_110--Hb_001449_100 Hb_011609_110--Hb_028271_020 Hb_011609_110--Hb_002784_100 Hb_000062_300--Hb_014497_080 Hb_003732_040 Hb_003732_040 Hb_000062_300--Hb_003732_040 Hb_000012_070 Hb_000012_070 Hb_000062_300--Hb_000012_070 Hb_000062_300--Hb_003891_080 Hb_003398_020 Hb_003398_020 Hb_000239_110--Hb_003398_020 Hb_005725_100 Hb_005725_100 Hb_000239_110--Hb_005725_100 Hb_003376_380 Hb_003376_380 Hb_000239_110--Hb_003376_380 Hb_004429_110 Hb_004429_110 Hb_000239_110--Hb_004429_110 Hb_000500_210 Hb_000500_210 Hb_000239_110--Hb_000500_210 Hb_014497_080--Hb_003732_040 Hb_014497_080--Hb_033834_050 Hb_014497_080--Hb_003398_020 Hb_086692_020 Hb_086692_020 Hb_014497_080--Hb_086692_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.4179 0.480156 2.10906 0.15935 0.246885
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.80215 20.9186 1.00612 1.68565 0.276202

CAGE analysis