Hb_000012_070

Information

Type -
Description -
Location Contig12: 154607-158254
Sequence    

Annotation

kegg
ID rcu:RCOM_0798550
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002516485.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q93Z79
description Cytochrome P450 714A1 OS=Arabidopsis thaliana GN=CYP714A1 PE=2 SV=1
trembl
ID B9RRW6
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0798550 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 714a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000012_070 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000258_180 0.088995292 - - PREDICTED: glutathione S-transferase U10-like [Vitis vinifera]
3 Hb_000062_300 0.1800491906 - - PREDICTED: uncharacterized protein LOC105644761 [Jatropha curcas]
4 Hb_032202_250 0.1810530012 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]
5 Hb_012573_010 0.18266146 - - PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
6 Hb_000284_190 0.1830770555 - - lactoylglutathione lyase, putative [Ricinus communis]
7 Hb_034482_040 0.1879708783 - - aspartate kinase, partial [Francisella tularensis]
8 Hb_001433_100 0.189711698 - - PREDICTED: F-box/LRR-repeat protein 3 isoform X1 [Jatropha curcas]
9 Hb_000045_210 0.1897361789 - - -
10 Hb_001085_180 0.1935338359 - - conserved hypothetical protein [Ricinus communis]
11 Hb_003226_240 0.1947122466 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
12 Hb_002989_040 0.2032494424 - - hypothetical protein 1 [Hevea brasiliensis]
13 Hb_004968_070 0.2042212545 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000920_320 0.204692682 transcription factor TF Family: Orphans hypothetical protein JCGZ_24525 [Jatropha curcas]
15 Hb_141194_010 0.2080004198 - - PREDICTED: protein ZINC INDUCED FACILITATOR 1-like isoform X2 [Populus euphratica]
16 Hb_001266_030 0.2105547103 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Jatropha curcas]
17 Hb_001140_240 0.2106427755 - - metal ion binding protein, putative [Ricinus communis]
18 Hb_014497_080 0.2159623597 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
19 Hb_003891_080 0.2228009145 - - hypothetical protein JCGZ_16710 [Jatropha curcas]
20 Hb_012305_020 0.2237245238 - - beta-1,3-glucanase [Hevea brasiliensis]

Gene co-expression network

sample Hb_000012_070 Hb_000012_070 Hb_000258_180 Hb_000258_180 Hb_000012_070--Hb_000258_180 Hb_000062_300 Hb_000062_300 Hb_000012_070--Hb_000062_300 Hb_032202_250 Hb_032202_250 Hb_000012_070--Hb_032202_250 Hb_012573_010 Hb_012573_010 Hb_000012_070--Hb_012573_010 Hb_000284_190 Hb_000284_190 Hb_000012_070--Hb_000284_190 Hb_034482_040 Hb_034482_040 Hb_000012_070--Hb_034482_040 Hb_000258_180--Hb_032202_250 Hb_000045_210 Hb_000045_210 Hb_000258_180--Hb_000045_210 Hb_000258_180--Hb_034482_040 Hb_003226_240 Hb_003226_240 Hb_000258_180--Hb_003226_240 Hb_001433_100 Hb_001433_100 Hb_000258_180--Hb_001433_100 Hb_014497_080 Hb_014497_080 Hb_000062_300--Hb_014497_080 Hb_003732_040 Hb_003732_040 Hb_000062_300--Hb_003732_040 Hb_042871_010 Hb_042871_010 Hb_000062_300--Hb_042871_010 Hb_033834_050 Hb_033834_050 Hb_000062_300--Hb_033834_050 Hb_003891_080 Hb_003891_080 Hb_000062_300--Hb_003891_080 Hb_032202_250--Hb_003226_240 Hb_001842_080 Hb_001842_080 Hb_032202_250--Hb_001842_080 Hb_000300_210 Hb_000300_210 Hb_032202_250--Hb_000300_210 Hb_032202_250--Hb_001433_100 Hb_032202_250--Hb_034482_040 Hb_002989_040 Hb_002989_040 Hb_032202_250--Hb_002989_040 Hb_006277_070 Hb_006277_070 Hb_012573_010--Hb_006277_070 Hb_000002_170 Hb_000002_170 Hb_012573_010--Hb_000002_170 Hb_012573_010--Hb_000258_180 Hb_012573_010--Hb_000284_190 Hb_012573_010--Hb_000062_300 Hb_001085_180 Hb_001085_180 Hb_000284_190--Hb_001085_180 Hb_000284_190--Hb_000258_180 Hb_001266_030 Hb_001266_030 Hb_000284_190--Hb_001266_030 Hb_000284_190--Hb_032202_250 Hb_034482_040--Hb_002989_040 Hb_034482_040--Hb_003226_240 Hb_034482_040--Hb_001433_100 Hb_023051_020 Hb_023051_020 Hb_034482_040--Hb_023051_020 Hb_141194_010 Hb_141194_010 Hb_034482_040--Hb_141194_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0395016 0.117775 0.0788954 0.0817855 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.34938 6.3225 0.665735 0.555325 0.049426

CAGE analysis