Hb_012573_010

Information

Type -
Description -
Location Contig12573: 2334-3127
Sequence    

Annotation

kegg
ID rcu:RCOM_0221430
description lactoylglutathione lyase, putative
nr
ID XP_012078750.1
description PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
swissprot
ID Q65KJ5
description Metallothiol transferase FosB OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=fosB PE=3 SV=1
trembl
ID A0A067KJD8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13305 PE=4 SV=1
Gene Ontology
ID GO:0016829
description lactoylglutathione lyase glyoxalase i family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012573_010 0.0 - - PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
2 Hb_006277_070 0.1542443839 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000002_170 0.1783584288 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 1B [Jatropha curcas]
4 Hb_000258_180 0.1807148985 - - PREDICTED: glutathione S-transferase U10-like [Vitis vinifera]
5 Hb_000012_070 0.18266146 - - cytochrome P450, putative [Ricinus communis]
6 Hb_000284_190 0.1961311757 - - lactoylglutathione lyase, putative [Ricinus communis]
7 Hb_000062_300 0.1993808773 - - PREDICTED: uncharacterized protein LOC105644761 [Jatropha curcas]
8 Hb_001085_180 0.2089069965 - - conserved hypothetical protein [Ricinus communis]
9 Hb_014497_080 0.2121449083 - - PREDICTED: uncharacterized transporter YBR287W-like [Jatropha curcas]
10 Hb_042871_010 0.2127939605 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
11 Hb_002784_150 0.2224941132 - - hypothetical protein POPTR_0001s06620g [Populus trichocarpa]
12 Hb_004968_070 0.223665998 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003732_040 0.2263436407 - - putative esterase family protein [Populus trichocarpa]
14 Hb_002890_070 0.2279818241 - - ATP-dependent RNA helicase family protein [Populus trichocarpa]
15 Hb_051067_010 0.2290858596 - - -
16 Hb_000656_410 0.2327357058 - - hypothetical protein POPTR_0003s06410g [Populus trichocarpa]
17 Hb_000962_080 0.2353456386 - - PREDICTED: uncharacterized protein LOC105131773 [Populus euphratica]
18 Hb_001892_090 0.2374937155 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000045_210 0.2432443501 - - -
20 Hb_032202_250 0.2471779348 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]

Gene co-expression network

sample Hb_012573_010 Hb_012573_010 Hb_006277_070 Hb_006277_070 Hb_012573_010--Hb_006277_070 Hb_000002_170 Hb_000002_170 Hb_012573_010--Hb_000002_170 Hb_000258_180 Hb_000258_180 Hb_012573_010--Hb_000258_180 Hb_000012_070 Hb_000012_070 Hb_012573_010--Hb_000012_070 Hb_000284_190 Hb_000284_190 Hb_012573_010--Hb_000284_190 Hb_000062_300 Hb_000062_300 Hb_012573_010--Hb_000062_300 Hb_006277_070--Hb_000002_170 Hb_003732_040 Hb_003732_040 Hb_006277_070--Hb_003732_040 Hb_051067_010 Hb_051067_010 Hb_006277_070--Hb_051067_010 Hb_002391_330 Hb_002391_330 Hb_006277_070--Hb_002391_330 Hb_015057_030 Hb_015057_030 Hb_006277_070--Hb_015057_030 Hb_023661_060 Hb_023661_060 Hb_000002_170--Hb_023661_060 Hb_000002_170--Hb_002391_330 Hb_034661_020 Hb_034661_020 Hb_000002_170--Hb_034661_020 Hb_000962_080 Hb_000962_080 Hb_000002_170--Hb_000962_080 Hb_000258_180--Hb_000012_070 Hb_032202_250 Hb_032202_250 Hb_000258_180--Hb_032202_250 Hb_000045_210 Hb_000045_210 Hb_000258_180--Hb_000045_210 Hb_034482_040 Hb_034482_040 Hb_000258_180--Hb_034482_040 Hb_003226_240 Hb_003226_240 Hb_000258_180--Hb_003226_240 Hb_001433_100 Hb_001433_100 Hb_000258_180--Hb_001433_100 Hb_000012_070--Hb_000062_300 Hb_000012_070--Hb_032202_250 Hb_000012_070--Hb_000284_190 Hb_000012_070--Hb_034482_040 Hb_001085_180 Hb_001085_180 Hb_000284_190--Hb_001085_180 Hb_000284_190--Hb_000258_180 Hb_001266_030 Hb_001266_030 Hb_000284_190--Hb_001266_030 Hb_000284_190--Hb_032202_250 Hb_014497_080 Hb_014497_080 Hb_000062_300--Hb_014497_080 Hb_000062_300--Hb_003732_040 Hb_042871_010 Hb_042871_010 Hb_000062_300--Hb_042871_010 Hb_033834_050 Hb_033834_050 Hb_000062_300--Hb_033834_050 Hb_003891_080 Hb_003891_080 Hb_000062_300--Hb_003891_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.18609 0.135037 0.759277 1.14092 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.48904 28.4043 1.77224 0.734513 0

CAGE analysis